RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 NIPA2Q8N8Q9 360 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 PIP4K2CQ8TBX8 421 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 IFI44Q8TCB0 444 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 IRGQQ8WZA9 623 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 PPP2R3CQ969Q6 453 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 SLC35C1Q96A29 364 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 THAP2Q9H0W7 228 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 EVA1BQ9NVM1 165 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 ASIC3Q9UHC3 531 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 TBC1D30Q9Y2I9 924 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 Q9Y3F1 56 aa9.49□□□□□ -0.89
SNHG3-201ENST00000413987 SIP14410 1827 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 C17orf102A2RUQ5 167 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 PFDN1O60925 122 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 HAUS5O94927 633 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 ALDH2P05091 517 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 ACRP10323 421 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 GPC1P35052 558 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 GPR3P46089 330 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 ZNF41P51814 821 aaPredicted RBP9.48□□□□□ -0.89
SNHG3-201ENST00000413987 AGFG1P52594 562 aaKnown RBP9.48□□□□□ -0.89
SNHG3-201ENST00000413987 GPC5P78333 572 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 ADAM17P78536 824 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 RALGDSQ12967 914 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 ITGA9Q13797 1035 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 PTK6Q13882 451 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 DOC2AQ14183 400 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 SNRNP35Q16560 246 aaKnown RBP9.48□□□□□ -0.89
SNHG3-201ENST00000413987 WDR72Q3MJ13 1102 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 SMUG1Q53HV7 270 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 GLRX5Q86SX6 157 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 TDRPQ86YL5 185 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 CYP4X1Q8N118 509 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 DPP10Q8N608 796 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 XXYLT1Q8NBI6 393 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 KLHDC9Q8NEP7 349 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 ARHGEF26Q96DR7 871 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 MIPEPQ99797 713 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 MTG1Q9BT17 334 aaPredicted RBP9.48□□□□□ -0.89
SNHG3-201ENST00000413987 INTS2Q9H0H0 1204 aaKnown RBP9.48□□□□□ -0.89
SNHG3-201ENST00000413987 UPF3AQ9H1J1 476 aaKnown RBP9.48□□□□□ -0.89
SNHG3-201ENST00000413987 NOL6Q9H6R4 1146 aaKnown RBP9.48□□□□□ -0.89
SNHG3-201ENST00000413987 EURLQ9NYK6 297 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 C5AR2Q9P296 337 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 ANAPC5Q9UJX4 755 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.48□□□□□ -0.89
SNHG3-201ENST00000413987 SCN10AQ9Y5Y9 1956 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 H0YIV9 168 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 CBX4O00257 560 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 PAGE1O75459 146 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 ATE1O95260 518 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 UBTFL6P0CB48 400 aaPredicted RBP9.48□□□□□ -0.89
SNHG3-201ENST00000413987 MYF5P13349 255 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 ATF2P15336 505 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 HTR1BP28222 390 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 PSMC2P35998 433 aaKnown RBP9.48□□□□□ -0.89
SNHG3-201ENST00000413987 VAMP2P63027 116 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 ALCAMQ13740 583 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 DRAP1Q14919 205 aaPredicted RBP9.48□□□□□ -0.89
SNHG3-201ENST00000413987 MAPK6Q16659 721 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 C1orf220Q5T0J3 134 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 ATPAF1Q5TC12 328 aaPredicted RBP9.48□□□□□ -0.89
SNHG3-201ENST00000413987 RFWD3Q6PCD5 774 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 TRABD2AQ86V40 505 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 HERC6Q8IVU3 1022 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 MAML2Q8IZL2 1156 aaPredicted RBP9.48□□□□□ -0.89
SNHG3-201ENST00000413987 OR8K3Q8NH51 312 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 OLIG1Q8TAK6 271 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 SPPL3Q8TCT6 385 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 TTC9Q92623 222 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 CFAP57Q96MR6 1250 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 DEFB118Q96PH6 123 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 SMC6Q96SB8 1091 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 CITED2Q99967 270 aaPredicted RBP9.48□□□□□ -0.89
SNHG3-201ENST00000413987 CEP44Q9C0F1 390 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 CHRDQ9H2X0 955 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 EPB41L1Q9H4G0 881 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 C11orf16Q9NQ32 467 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 RPRD1BQ9NQG5 326 aaKnown RBP9.48□□□□□ -0.89
SNHG3-201ENST00000413987 IARS2Q9NSE4 1012 aaKnown RBP9.48□□□□□ -0.89
SNHG3-201ENST00000413987 DNAJC12Q9UKB3 198 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 AJAP1Q9UKB5 411 aaPredicted RBP9.48□□□□□ -0.89
SNHG3-201ENST00000413987 PIN4Q9Y237 131 aaKnown RBP9.48□□□□□ -0.89
SNHG3-201ENST00000413987 ZNF510Q9Y2H8 683 aa9.48□□□□□ -0.89
SNHG3-201ENST00000413987 COL1A2P08123 1366 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 PTPRJQ12913 1337 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 TRAV6A0A075B6T7 132 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 MBLAC1A4D2B0 266 aaPredicted RBP9.47□□□□□ -0.89
SNHG3-201ENST00000413987 AGAP14A8MT82 685 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 H7BY64 318 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 SYT5O00445 386 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 TSPAN1O60635 241 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 MAGEC1O60732 1142 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 GPR32O75388 356 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 BCAS2O75934 225 aaPredicted RBP9.47□□□□□ -0.89
SNHG3-201ENST00000413987 COMTP21964 271 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 CRABP2P29373 138 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 EEF1DP29692 281 aaKnown RBP9.47□□□□□ -0.89
SNHG3-201ENST00000413987 GCLMP48507 274 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 RAP1GDS1P52306 607 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms