RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 C15orf52Q6ZUT6 534 aaKnown RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 ASB18Q6ZVZ8 466 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 NEK10Q6ZWH5 1172 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 POC5Q8NA72 575 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 MBD3L2Q8NHZ7 208 aaPredicted RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 FAM213BQ8TBF2 198 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 TBC1D15Q8TC07 691 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 RORBQ92753 470 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 KAT2AQ92830 837 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 FAM136AQ96C01 138 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 MED8Q96G25 268 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZC3HAV1LQ96H79 300 aaKnown RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 LINC00477Q96M19 166 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 TCEANC2Q96MN5 208 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 DNAJC2Q99543 621 aaKnown RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 P2RX7Q99572 595 aaKnown RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 RIOK1Q9BRS2 568 aaKnown RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 ALG1Q9BT22 464 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 C1orf43Q9BWL3 253 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 TUT1Q9H6E5 874 aaKnown RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 UCK1Q9HA47 277 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZBTB26Q9HCK0 441 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 SERHLQ9NQF3 203 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 DDX18Q9NVP1 670 aaKnown RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 C1RLQ9NZP8 487 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 CPA4Q9UI42 421 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 TUBE1Q9UJT0 475 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 UTP18Q9Y5J1 556 aaKnown RBP eCLIP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 SIRT4Q9Y6E7 314 aaPredicted RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 TICRRQ7Z2Z1 1910 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 TNKSO95271 1327 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 SPTBN1Q01082 2364 aaKnown RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 PRUNE2Q8WUY3 3088 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 REV3LO60673 3130 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 NCOA6Q14686 2063 aaPredicted RBP-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 LOC101059948A0A1B0GTJ6 334 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 UBA6A0AVT1 1052 aaPredicted RBP-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 GRIFINA4D1Z8 144 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 MFSD2BA6NFX1 497 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 MINDY4BA8MYZ0 360 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 C16orf97H3BN30 126 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF561-AS1K7EIQ3 104 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 MDM4O15151 490 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 VILLO15195 856 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 MRPS12O15235 138 aaKnown RBP-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 PRAMEF4O60810 478 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 N4BP1O75113 896 aaKnown RBP-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 DAB1O75553 588 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 RHBDL1O75783 438 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 LUC7L3O95232 432 aaKnown RBP-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 NAPSAO96009 420 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 IGHV3-13P01766 116 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 CYP21A2P08686 494 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 DLDP09622 509 aaKnown RBP-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 ERVK-10P10266 1014 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 PSG2P11465 335 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 GP1BBP13224 206 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 EEF2P13639 858 aaKnown RBP-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 ENO3P13929 434 aaPredicted RBP-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 PHKG2P15735 406 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 ALOX15P16050 662 aaPredicted RBP-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 GNB3P16520 340 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 TYMPP19971 482 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 ELAVL4P26378 380 aaKnown RBP-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 CRHR1P34998 444 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 NSFP46459 744 aaKnown RBP-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 RGRP47804 291 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 RFX5P48382 616 aaPredicted RBP-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 MMP15P51511 669 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 MECP2P51608 486 aaKnown RBP-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 PRKAA2P54646 552 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 TPTEP56180 551 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 WNT3P56703 355 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 REG3AQ06141 175 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF616Q08AN1 781 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 TRAF1Q13077 416 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF154Q13106 437 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 PWP1Q13610 501 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF234Q14588 700 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 CPEB4Q17RY0 729 aaKnown RBP eCLIP-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 MPEG1Q2M385 716 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 RFX4Q33E94 735 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 PIK3CD-AS1Q5SR53 167 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 DCAF12L1Q5VU92 463 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 AFMIDQ63HM1 303 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 ANKRD40Q6AI12 368 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF770Q6IQ21 691 aaPredicted RBP-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 CYB5D1Q6P9G0 228 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 NOSTRINQ8IVI9 506 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 TMEM116Q8NCL8 245 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF397Q8NF99 534 aaPredicted RBP-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 KLHL6Q8WZ60 621 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 NPIPB3Q92617 1050 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 IL22RA2Q969J5 263 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 MKL1Q969V6 931 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 SPATA17Q96L03 361 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 FAM218AQ96MZ4 157 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 ODF3Q96PU9 254 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 SEMA3CQ99985 751 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 ELAC2Q9BQ52 826 aaKnown RBP-1.5□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms