RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 TMEM8BA6NDV4 472 aa17.83■□□□□ 0.44
LSM5-204ENST00000409909 RFPL3O75679 317 aa17.83■□□□□ 0.44
LSM5-204ENST00000409909 C1SP09871 688 aa17.83■□□□□ 0.44
LSM5-204ENST00000409909 C6P13671 934 aa17.83■□□□□ 0.44
LSM5-204ENST00000409909 NME1P15531 152 aaKnown RBP17.83■□□□□ 0.44
LSM5-204ENST00000409909 CKMT2P17540 419 aa17.83■□□□□ 0.44
LSM5-204ENST00000409909 CR2P20023 1033 aa17.83■□□□□ 0.44
LSM5-204ENST00000409909 SERPINB6P35237 376 aa17.83■□□□□ 0.44
LSM5-204ENST00000409909 CLDN6P56747 220 aa17.83■□□□□ 0.44
LSM5-204ENST00000409909 AP1S1P61966 158 aa17.83■□□□□ 0.44
LSM5-204ENST00000409909 ZNF235Q14590 738 aa17.83■□□□□ 0.44
LSM5-204ENST00000409909 IRF4Q15306 451 aa17.83■□□□□ 0.44
LSM5-204ENST00000409909 WSCD2Q2TBF2 565 aa17.83■□□□□ 0.44
LSM5-204ENST00000409909 ANKRD20A8PQ5CZ79 823 aa17.83■□□□□ 0.44
LSM5-204ENST00000409909 ERAP2Q6P179 960 aa17.83■□□□□ 0.44
LSM5-204ENST00000409909 PARGQ86W56 976 aa17.83■□□□□ 0.44
LSM5-204ENST00000409909 ATPAF2Q8N5M1 289 aa17.83■□□□□ 0.44
LSM5-204ENST00000409909 KCTD6Q8NC69 237 aa17.83■□□□□ 0.44
LSM5-204ENST00000409909 CCDC42Q96M95 316 aa17.83■□□□□ 0.44
LSM5-204ENST00000409909 NOD2Q9HC29 1040 aa17.83■□□□□ 0.44
LSM5-204ENST00000409909 TMEM110-MUSTN1A8MSY1 372 aa17.82■□□□□ 0.44
LSM5-204ENST00000409909 SCAMP1O15126 338 aa17.82■□□□□ 0.44
LSM5-204ENST00000409909 MFSD11O43934 449 aa17.82■□□□□ 0.44
LSM5-204ENST00000409909 NEBLO76041 1014 aa17.82■□□□□ 0.44
LSM5-204ENST00000409909 MAN1A1P33908 653 aa17.82■□□□□ 0.44
LSM5-204ENST00000409909 HNRNPKP61978 463 aaKnown RBP eCLIP17.82■□□□□ 0.44
LSM5-204ENST00000409909 RALGDSQ12967 914 aa17.82■□□□□ 0.44
LSM5-204ENST00000409909 MESDQ14696 234 aa17.82■□□□□ 0.44
LSM5-204ENST00000409909 LRRC14Q15048 493 aa17.82■□□□□ 0.44
LSM5-204ENST00000409909 PAFAH1B3Q15102 231 aaKnown RBP17.82■□□□□ 0.44
LSM5-204ENST00000409909 PDK2Q15119 407 aa17.82■□□□□ 0.44
LSM5-204ENST00000409909 NCBP2-AS2Q69YL0 99 aa17.82■□□□□ 0.44
LSM5-204ENST00000409909 SARM1Q6SZW1 724 aa17.82■□□□□ 0.44
LSM5-204ENST00000409909 GALNT15Q8N3T1 639 aa17.82■□□□□ 0.44
LSM5-204ENST00000409909 ZNF548Q8NEK5 533 aaPredicted RBP17.82■□□□□ 0.44
LSM5-204ENST00000409909 ZCCHC14Q8WYQ9 949 aaKnown RBP17.82■□□□□ 0.44
LSM5-204ENST00000409909 NUDCD1Q96RS6 583 aa17.82■□□□□ 0.44
LSM5-204ENST00000409909 MGME1Q9BQP7 344 aa17.82■□□□□ 0.44
LSM5-204ENST00000409909 C1QTNF7Q9BXJ2 289 aa17.82■□□□□ 0.44
LSM5-204ENST00000409909 TCEAL2Q9H3H9 227 aaPredicted RBP17.82■□□□□ 0.44
LSM5-204ENST00000409909 PCDHGC4Q9Y5F7 938 aa17.82■□□□□ 0.44
LSM5-204ENST00000409909 PKD1L2Q7Z442 2459 aa17.82■□□□□ 0.44
LSM5-204ENST00000409909 AKR1B15C9JRZ8 316 aaPredicted RBP17.81■□□□□ 0.44
LSM5-204ENST00000409909 HTRA2O43464 458 aaPredicted RBP17.81■□□□□ 0.44
LSM5-204ENST00000409909 MYF5P13349 255 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 JUNDP17535 347 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 ACP1P24666 158 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 HSPA9P38646 679 aaKnown RBP17.81■□□□□ 0.44
LSM5-204ENST00000409909 THOP1P52888 689 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 MAXP61244 160 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 YPEL5P62699 121 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 GALNT2Q10471 571 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 CAMK2BQ13554 666 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 AGERQ15109 404 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 MARC1Q5VT66 337 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 LIPIQ6XZB0 460 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 CNGA4Q8IV77 575 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 TEX26Q8N6G2 289 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 PQLC3Q8N755 202 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 SPOCK2Q92563 424 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 RAPGEF5Q92565 580 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 FAF2Q96CS3 445 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 ZNF670Q9BS34 389 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 NLGN3Q9NZ94 848 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 LCMT1Q9UIC8 334 aa17.81■□□□□ 0.44
LSM5-204ENST00000409909 NBEAQ8NFP9 2946 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 LY6G6EA0A0G2JKS1 128 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.8■□□□□ 0.44
LSM5-204ENST00000409909 A8MX80 341 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 K7ESM1 405 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 TAF4O00268 1085 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 MTA2O94776 668 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 MAP3K6O95382 1288 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 KRT7P08729 469 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 GM2AP17900 193 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 GARSP41250 739 aaKnown RBP17.8■□□□□ 0.44
LSM5-204ENST00000409909 MMP13P45452 471 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 POLR2LP62875 67 aaKnown RBP17.8■□□□□ 0.44
LSM5-204ENST00000409909 ILKQ13418 452 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 PTK2BQ14289 1009 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 INPP5AQ14642 412 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 NYAP1Q6ZVC0 841 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 DPPA4Q7L190 304 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 TMPRSS12Q86WS5 348 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 LRRC49Q8IUZ0 686 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 RBFAQ8N0V3 343 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 PLA2G15Q8NCC3 412 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 LRRN4Q8WUT4 740 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 TRIM5Q9C035 493 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 SCUBE2Q9NQ36 999 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 U3KQA8 63 aa17.8■□□□□ 0.44
LSM5-204ENST00000409909 ITPR1Q14643 2758 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 CFAP69A5D8W1 941 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 NEMP2A6NFY4 417 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 H3BM21 787 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 TOR1BO14657 336 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 AQP9O43315 295 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 LZTS3O60299 673 aaPredicted RBP17.79■□□□□ 0.44
LSM5-204ENST00000409909 GCATO75600 419 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 RECQL5O94762 991 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms