RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 FASTKD1Q53R41 847 aaKnown RBP7.56□□□□□ -1.2
CXCR4-202ENST00000409817 TAF1BQ53T94 588 aaPredicted RBP7.56□□□□□ -1.2
CXCR4-202ENST00000409817 NADSYN1Q6IA69 706 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 NXPE4Q6UWF7 544 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 ZNF783Q6ZMS7 281 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 CLEC14AQ86T13 490 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 DDX53Q86TM3 631 aaKnown RBP7.56□□□□□ -1.2
CXCR4-202ENST00000409817 SETD3Q86TU7 594 aaPredicted RBP7.56□□□□□ -1.2
CXCR4-202ENST00000409817 ZC3HC1Q86WB0 502 aaKnown RBP7.56□□□□□ -1.2
CXCR4-202ENST00000409817 ZNF354CQ86Y25 554 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 WDR75Q8IWA0 830 aaKnown RBP7.56□□□□□ -1.2
CXCR4-202ENST00000409817 PGBD3Q8N328 593 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 PSMG2Q969U7 264 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 KLHL29Q96CT2 875 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 FEM1CQ96JP0 617 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 TMEM237Q96Q45 408 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 RAB3IPQ96QF0 476 aaPredicted RBP7.56□□□□□ -1.2
CXCR4-202ENST00000409817 AGAP2Q99490 1192 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 VN1R3Q9BXE9 311 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 WWP1Q9H0M0 922 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 MYLK2Q9H1R3 596 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 RC3H2Q9HBD1 1191 aaKnown RBP7.56□□□□□ -1.2
CXCR4-202ENST00000409817 SLC40A1Q9NP59 571 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 NT5MQ9NPB1 228 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 IARS2Q9NSE4 1012 aaKnown RBP7.56□□□□□ -1.2
CXCR4-202ENST00000409817 SPG21Q9NZD8 308 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.56□□□□□ -1.2
CXCR4-202ENST00000409817 COPG2Q9UBF2 871 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 ZFP69BQ9UJL9 534 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 TLK1Q9UKI8 766 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 EMCNQ9ULC0 261 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 SORCS3Q9UPU3 1222 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 SSX2IPQ9Y2D8 614 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 CHD5Q8TDI0 1954 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 A0A096LPK6 155 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 A0A0G2JND7 137 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 A0A1B0GVM2 712 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 LOC285095A0A1B0GVY8 99 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 ILVBLA1L0T0 632 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 TCAF2A6NFQ2 919 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 J3KR12 359 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 TRAFD1O14545 582 aaPredicted RBP7.55□□□□□ -1.2
CXCR4-202ENST00000409817 ADAM12O43184 909 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 SLC7A4O43246 635 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 BAIAP3O94812 1187 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 SNUPNO95149 360 aaKnown RBP7.55□□□□□ -1.2
CXCR4-202ENST00000409817 GSRP00390 522 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 FGF1P05230 155 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 C2P06681 752 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 HMBSP08397 361 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 HOXB8P17481 243 aaPredicted RBP7.55□□□□□ -1.2
CXCR4-202ENST00000409817 TARSP26639 723 aaKnown RBP7.55□□□□□ -1.2
CXCR4-202ENST00000409817 CRABP2P29373 138 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 ELF1P32519 619 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 GNA12Q03113 381 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 SLC20A2Q08357 652 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 ITKQ08881 620 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 SF3A3Q12874 501 aaKnown RBP eCLIP7.55□□□□□ -1.2
CXCR4-202ENST00000409817 RIPK1Q13546 671 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 SLC12A1Q13621 1099 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 TBCCQ15814 346 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 PABPC1LQ4VXU2 614 aaKnown RBP7.55□□□□□ -1.2
CXCR4-202ENST00000409817 SPOUT1Q5T280 376 aaKnown RBP7.55□□□□□ -1.2
CXCR4-202ENST00000409817 PEAR1Q5VY43 1037 aaPredicted RBP7.55□□□□□ -1.2
CXCR4-202ENST00000409817 MBLAC2Q68D91 279 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 ASRGL1Q7L266 308 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 ITIH5Q86UX2 942 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 HERC6Q8IVU3 1022 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 TCEAL8Q8IYN2 117 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 LGI2Q8N0V4 545 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 C2CD4AQ8NCU7 369 aaPredicted RBP7.55□□□□□ -1.2
CXCR4-202ENST00000409817 ARRDC2Q8TBH0 407 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 PPP4R1Q8TF05 950 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 TMEM120AQ9BXJ8 343 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 GSX2Q9BZM3 304 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 TGIF2Q9GZN2 237 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 LRMDAQ9H2I8 198 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 PDFQ9HBH1 243 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 CYP4F11Q9HBI6 524 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 ALG13Q9NP73 1137 aaKnown RBP7.55□□□□□ -1.2
CXCR4-202ENST00000409817 ATP13A2Q9NQ11 1180 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 ARHGEF3Q9NR81 526 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 LATS2Q9NRM7 1088 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 KLC4Q9NSK0 619 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 CUEDC1Q9NWM3 386 aaPredicted RBP7.55□□□□□ -1.2
CXCR4-202ENST00000409817 SLC17A6Q9P2U8 582 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 LNPEPQ9UIQ6 1025 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 STOML2Q9UJZ1 356 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 YIPF1Q9Y548 306 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 ASB3Q9Y575 518 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 TMEM114B3SHH9 223 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 COCHO43405 550 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 CCDC22O60826 627 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 VAPBO95292 243 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 SEC24AO95486 1093 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 MMP2P08253 660 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 SERPINF2P08697 491 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 FGF3P11487 239 aaPredicted RBP7.55□□□□□ -1.2
CXCR4-202ENST00000409817 MYL4P12829 197 aa7.55□□□□□ -1.2
CXCR4-202ENST00000409817 CPA3P15088 417 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms