RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 HEMGNQ9BXL5 484 aa10.99□□□□□ -0.65
CHMP3-205ENST00000409810 SLC17A9Q9BYT1 436 aa10.99□□□□□ -0.65
CHMP3-205ENST00000409810 EBF2Q9HAK2 575 aa10.99□□□□□ -0.65
CHMP3-205ENST00000409810 NOD2Q9HC29 1040 aa10.99□□□□□ -0.65
CHMP3-205ENST00000409810 PCDH12Q9NPG4 1184 aa10.99□□□□□ -0.65
CHMP3-205ENST00000409810 PHTF1Q9UMS5 762 aa10.99□□□□□ -0.65
CHMP3-205ENST00000409810 PACSIN2Q9UNF0 486 aaPredicted RBP10.99□□□□□ -0.65
CHMP3-205ENST00000409810 ZFR2Q9UPR6 939 aaKnown RBP10.99□□□□□ -0.65
CHMP3-205ENST00000409810 ITM2BQ9Y287 266 aa10.99□□□□□ -0.65
CHMP3-205ENST00000409810 ANKRD6Q9Y2G4 727 aa10.99□□□□□ -0.65
CHMP3-205ENST00000409810 TDRD6O60522 2096 aaKnown RBP10.99□□□□□ -0.65
CHMP3-205ENST00000409810 A0A1B0GVT2 93 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 CFAP69A5D8W1 941 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 C4orf47A7E2U8 309 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 H7C0C1 242 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 RIOK3O14730 519 aaKnown RBP10.98□□□□□ -0.65
CHMP3-205ENST00000409810 DDX3YO15523 660 aaKnown RBP10.98□□□□□ -0.65
CHMP3-205ENST00000409810 ZSCAN12O43309 604 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 GDF9O60383 454 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 DFNA5O60443 496 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 GJB3O75712 270 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 PGLSO95336 258 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 PRLRP16471 622 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 MMP12P39900 470 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 ATP5OP48047 213 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 CSNK1EP49674 416 aaKnown RBP10.98□□□□□ -0.65
CHMP3-205ENST00000409810 FAM193AP78312 1265 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 DSC2Q02487 901 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 TRAF2Q12933 501 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 ZBTB17Q13105 803 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 PUM1Q14671 1186 aaKnown RBP eCLIP10.98□□□□□ -0.65
CHMP3-205ENST00000409810 GSE1Q14687 1217 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 NOMO1Q15155 1222 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 TMEM52BQ4KMG9 183 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 TEX44Q53QW1 395 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 USP45Q70EL2 814 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 DPPA4Q7L190 304 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 ZC3H18Q86VM9 953 aaKnown RBP10.98□□□□□ -0.65
CHMP3-205ENST00000409810 CDKL3Q8IVW4 592 aaPredicted RBP10.98□□□□□ -0.65
CHMP3-205ENST00000409810 OXR1Q8N573 874 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 TTC13Q8NBP0 860 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 TMEM145Q8NBT3 493 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 LRRN4Q8WUT4 740 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 ALG3Q92685 438 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 KLK6Q92876 244 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 PDLIM2Q96JY6 352 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 QKIQ96PU8 341 aaKnown RBP eCLIP10.98□□□□□ -0.65
CHMP3-205ENST00000409810 LENG8Q96PV6 779 aaPredicted RBP10.98□□□□□ -0.65
CHMP3-205ENST00000409810 FSCN3Q9NQT6 498 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 GDF3Q9NR23 364 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 RXFP3Q9NSD7 469 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 DNAAF2Q9NVR5 837 aaKnown RBP10.98□□□□□ -0.65
CHMP3-205ENST00000409810 SAE1Q9UBE0 346 aaPredicted RBP10.98□□□□□ -0.65
CHMP3-205ENST00000409810 GGT7Q9UJ14 662 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 DNPEPQ9ULA0 475 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 PCDHB9Q9Y5E1 797 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 PCDHGC4Q9Y5F7 938 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 RAI2Q9Y5P3 530 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 HS3ST3A1Q9Y663 406 aa10.98□□□□□ -0.65
CHMP3-205ENST00000409810 CNOT1A5YKK6 2376 aaKnown RBP10.98□□□□□ -0.65
CHMP3-205ENST00000409810 SPTBN4Q9H254 2564 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 A0A1W2PR77 199 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 TTC24A2A3L6 582 aaPredicted RBP10.97□□□□□ -0.65
CHMP3-205ENST00000409810 IGLON5A6NGN9 336 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 A6NNZ2 444 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 CDX4O14627 284 aaPredicted RBP10.97□□□□□ -0.65
CHMP3-205ENST00000409810 FPGTO14772 594 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 YKT6O15498 198 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 SPINT1O43278 529 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 LZTS3O60299 673 aaPredicted RBP10.97□□□□□ -0.65
CHMP3-205ENST00000409810 STK10O94804 968 aaKnown RBP10.97□□□□□ -0.65
CHMP3-205ENST00000409810 PAK4O96013 591 aaPredicted RBP10.97□□□□□ -0.65
CHMP3-205ENST00000409810 ELFN1P0C7U0 828 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 PYGMP11217 842 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 C6P13671 934 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 PTPN3P26045 913 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 TNNT3P45378 269 aaPredicted RBP10.97□□□□□ -0.65
CHMP3-205ENST00000409810 ID4P47928 161 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 EPHB1P54762 984 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 RPL26P61254 145 aaKnown RBP10.97□□□□□ -0.65
CHMP3-205ENST00000409810 OTUD4Q01804 1114 aaKnown RBP10.97□□□□□ -0.65
CHMP3-205ENST00000409810 ADCY2Q08462 1091 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 ZNF211Q13398 564 aaPredicted RBP10.97□□□□□ -0.65
CHMP3-205ENST00000409810 RPS6KA1Q15418 735 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 SLC14A2Q15849 920 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 KIF19Q2TAC6 998 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 UAP1L1Q3KQV9 507 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 LAYNQ6UX15 382 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 ZSWIM9Q86XI8 627 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 DCP2Q8IU60 420 aaKnown RBP10.97□□□□□ -0.65
CHMP3-205ENST00000409810 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.97□□□□□ -0.65
CHMP3-205ENST00000409810 ACTL9Q8TC94 416 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 HTR3CQ8WXA8 447 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 KLHDC7BQ96G42 594 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 AGAP3Q96P47 875 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 MYOCQ99972 504 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 WRAP53Q9BUR4 548 aaKnown RBP10.97□□□□□ -0.65
CHMP3-205ENST00000409810 C1QTNF2Q9BXJ5 285 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 TDRD1Q9BXT4 1180 aaKnown RBP10.97□□□□□ -0.65
CHMP3-205ENST00000409810 SLC25A51Q9H1U9 297 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms