RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 SMYD2Q9NRG4 433 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 NFS1Q9Y697 457 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 IGLV5-37A0A075B6J1 123 aa4.21□□□□□ -1.74
PMS1-203ENST00000409593 TEX13CA0A0J9YWL9 993 aa4.21□□□□□ -1.74
PMS1-203ENST00000409593 SRRM3A6NNA2 597 aaPredicted RBP4.21□□□□□ -1.74
PMS1-203ENST00000409593 TNPO2O14787 897 aaKnown RBP4.21□□□□□ -1.74
PMS1-203ENST00000409593 NCAM2O15394 837 aa4.21□□□□□ -1.74
PMS1-203ENST00000409593 DAOP14920 347 aa4.21□□□□□ -1.74
PMS1-203ENST00000409593 GALNT2Q10471 571 aa4.21□□□□□ -1.74
PMS1-203ENST00000409593 KIF19Q2TAC6 998 aa4.21□□□□□ -1.74
PMS1-203ENST00000409593 RHBDF2Q6PJF5 856 aa4.21□□□□□ -1.74
PMS1-203ENST00000409593 NOXA1Q86UR1 476 aa4.21□□□□□ -1.74
PMS1-203ENST00000409593 ZC3HC1Q86WB0 502 aaKnown RBP4.21□□□□□ -1.74
PMS1-203ENST00000409593 TMTC1Q8IUR5 882 aa4.21□□□□□ -1.74
PMS1-203ENST00000409593 ZBTB10Q96DT7 871 aa4.21□□□□□ -1.74
PMS1-203ENST00000409593 OR1F2PQ96R84 312 aa4.21□□□□□ -1.74
PMS1-203ENST00000409593 LBHD1Q9BQE6 289 aaPredicted RBP4.21□□□□□ -1.74
PMS1-203ENST00000409593 SAGE1Q9NXZ1 904 aa4.21□□□□□ -1.74
PMS1-203ENST00000409593 TBX20Q9UMR3 447 aa4.21□□□□□ -1.74
PMS1-203ENST00000409593 CDC14AQ9UNH5 594 aa4.21□□□□□ -1.74
PMS1-203ENST00000409593 SNX9Q9Y5X1 595 aa4.21□□□□□ -1.74
PMS1-203ENST00000409593 LOC102724159A0A0B4J2E5 919 aa4.2□□□□□ -1.74
PMS1-203ENST00000409593 HSPA12AO43301 675 aa4.2□□□□□ -1.74
PMS1-203ENST00000409593 KLK8O60259 260 aa4.2□□□□□ -1.74
PMS1-203ENST00000409593 ZIC3O60481 467 aa4.2□□□□□ -1.74
PMS1-203ENST00000409593 NDUFB4O95168 129 aa4.2□□□□□ -1.74
PMS1-203ENST00000409593 ETFAP13804 333 aa4.2□□□□□ -1.74
PMS1-203ENST00000409593 EFNA5P52803 228 aa4.2□□□□□ -1.74
PMS1-203ENST00000409593 GRIK3Q13003 919 aa4.2□□□□□ -1.74
PMS1-203ENST00000409593 PPP2R5BQ15173 497 aa4.2□□□□□ -1.74
PMS1-203ENST00000409593 PWP2Q15269 919 aaKnown RBP4.2□□□□□ -1.74
PMS1-203ENST00000409593 CALCRLQ16602 461 aa4.2□□□□□ -1.74
PMS1-203ENST00000409593 TDRPQ86YL5 185 aa4.2□□□□□ -1.74
PMS1-203ENST00000409593 C11orf65Q8NCR3 313 aa4.2□□□□□ -1.74
PMS1-203ENST00000409593 C20orf141Q9NUB4 165 aa4.2□□□□□ -1.74
PMS1-203ENST00000409593 HCN3Q9P1Z3 774 aa4.2□□□□□ -1.74
PMS1-203ENST00000409593 SLC9A2Q9UBY0 812 aa4.2□□□□□ -1.74
PMS1-203ENST00000409593 HSPB7Q9UBY9 170 aa4.2□□□□□ -1.74
PMS1-203ENST00000409593 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.2□□□□□ -1.74
PMS1-203ENST00000409593 FAM96BQ9Y3D0 163 aa4.2□□□□□ -1.74
PMS1-203ENST00000409593 SAA2-SAA4A0A096LPE2 208 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 GAGE10A6NGK3 116 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 SLC16A5O15375 505 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 EIF3JO75822 258 aaKnown RBP4.19□□□□□ -1.74
PMS1-203ENST00000409593 IGHV4-30-4P0DP06 118 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 CHATP28329 748 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 ERVFC1-1P60608 527 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 UFM1P61960 85 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 VAMP2P63027 116 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 MMEL1Q495T6 779 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 ZCCHC9Q8N567 271 aaKnown RBP4.19□□□□□ -1.74
PMS1-203ENST00000409593 HVCN1Q96D96 273 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 SCMH1Q96GD3 660 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 APOPT1Q96IL0 206 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 ZNF570Q96NI8 536 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 CSF3RQ99062 836 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 FUZQ9BT04 418 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 VEZTQ9HBM0 779 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 NOX4Q9NPH5 578 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 ICAM5Q9UMF0 924 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 TSPAN4O14817 238 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 NEDD9Q14511 834 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 FAM69BQ5VUD6 431 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 NAA35Q5VZE5 725 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 DHX40Q8IX18 779 aaKnown RBP4.19□□□□□ -1.74
PMS1-203ENST00000409593 SMAP1Q8IYB5 467 aaPredicted RBP4.19□□□□□ -1.74
PMS1-203ENST00000409593 SCCPDHQ8NBX0 429 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 ZNF114Q8NC26 417 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 SNAPC3Q92966 411 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 FBXL8Q96CD0 374 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 KLHL15Q96M94 604 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 DUX5Q96PT3 197 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 BPIFA1Q9NP55 256 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 SLCO3A1Q9UIG8 710 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 ZNF112Q9UJU3 913 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 NFE2L3Q9Y4A8 694 aa4.19□□□□□ -1.74
PMS1-203ENST00000409593 SCN5AQ14524 2016 aa4.18□□□□□ -1.74
PMS1-203ENST00000409593 A0A1B0GUV1 79 aa4.18□□□□□ -1.74
PMS1-203ENST00000409593 CLGNO14967 610 aa4.18□□□□□ -1.74
PMS1-203ENST00000409593 HOXC11O43248 304 aaPredicted RBP4.18□□□□□ -1.74
PMS1-203ENST00000409593 PYGLP06737 847 aa4.18□□□□□ -1.74
PMS1-203ENST00000409593 HEXAP06865 529 aa4.18□□□□□ -1.74
PMS1-203ENST00000409593 XBP1P17861 261 aa4.18□□□□□ -1.74
PMS1-203ENST00000409593 CD58P19256 250 aa4.18□□□□□ -1.74
PMS1-203ENST00000409593 ITGAXP20702 1163 aa4.18□□□□□ -1.74
PMS1-203ENST00000409593 GPTP24298 496 aa4.18□□□□□ -1.74
PMS1-203ENST00000409593 PAFAH1B1P43034 410 aa4.18□□□□□ -1.74
PMS1-203ENST00000409593 DLG1Q12959 904 aa4.18□□□□□ -1.74
PMS1-203ENST00000409593 CAMK1Q14012 370 aa4.18□□□□□ -1.74
PMS1-203ENST00000409593 HIST2H2ACQ16777 129 aaPredicted RBP4.18□□□□□ -1.74
PMS1-203ENST00000409593 TCTN1Q2MV58 587 aa4.18□□□□□ -1.74
PMS1-203ENST00000409593 CPLX2Q6PUV4 134 aaKnown RBP4.18□□□□□ -1.74
PMS1-203ENST00000409593 LCTLQ6UWM7 567 aa4.18□□□□□ -1.74
PMS1-203ENST00000409593 B3GNT6Q6ZMB0 384 aa4.18□□□□□ -1.74
PMS1-203ENST00000409593 ZCCHC10Q8TBK6 192 aa4.18□□□□□ -1.74
PMS1-203ENST00000409593 CREB3L4Q8TEY5 395 aa4.18□□□□□ -1.74
PMS1-203ENST00000409593 HTRA1Q92743 480 aa4.18□□□□□ -1.74
PMS1-203ENST00000409593 GAREM1Q9H706 876 aa4.18□□□□□ -1.74
PMS1-203ENST00000409593 DDX31Q9H8H2 851 aaKnown RBP4.18□□□□□ -1.74
PMS1-203ENST00000409593 MAGEE1Q9HCI5 957 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms