RNA–Protein interactions for RNA: ENST00000409368.5

SUMO1-206, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 4 BASIC

Gene SUMO1, Length 1,187 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-206ENST00000409368 GIMD1P0DJR0 217 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 CDK4P11802 303 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 CCNCP24863 283 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 CLDN2P57739 230 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 POLR2LP62875 67 aaKnown RBP13.03□□□□□ -0.32
SUMO1-206ENST00000409368 BCL2L1Q07817 233 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 BNIP3Q12983 259 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 FZD2Q14332 565 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 TAZQ16635 292 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 PRAMEF14Q5SWL7 426 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 MARC1Q5VT66 337 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 SLC9A4Q6AI14 798 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 ERAP2Q6P179 960 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 Q6ZSR6 202 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 GAS2L3Q86XJ1 694 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 KCTD6Q8NC69 237 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 GATA6Q92908 595 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 CNTNAP3BQ96NU0 1288 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 RNF157Q96PX1 679 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 SCNM1Q9BWG6 230 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 C1QTNF7Q9BXJ2 289 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 CNTNAP3Q9BZ76 1288 aa13.03□□□□□ -0.32
SUMO1-206ENST00000409368 MATN3O15232 486 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 MMP20O60882 483 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 PIAS2O75928 621 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 CSF2P04141 144 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 ATXN1LP0C7T5 689 aaKnown RBP13.02□□□□□ -0.33
SUMO1-206ENST00000409368 NME1P15531 152 aaKnown RBP13.02□□□□□ -0.33
SUMO1-206ENST00000409368 ITIH2P19823 946 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 MX2P20592 715 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 CES1P23141 567 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 DGKAP23743 735 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 IGFALSP35858 605 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 MMP13P45452 471 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 PEX5P50542 639 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 SCNN1BP51168 640 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 IL9RQ01113 521 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 FOXC1Q12948 553 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 RALGDSQ12967 914 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 ZNF235Q14590 738 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 MESDQ14696 234 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 IFI16Q16666 785 aaKnown RBP13.02□□□□□ -0.33
SUMO1-206ENST00000409368 PROX2Q3B8N5 592 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 TIGD7Q6NT04 549 aaPredicted RBP13.02□□□□□ -0.33
SUMO1-206ENST00000409368 DPPA4Q7L190 304 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 GATAD2AQ86YP4 633 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 BBS5Q8N3I7 341 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 SLC25A45Q8N413 288 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 PLD5Q8N7P1 536 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 CXorf40AQ8TE69 158 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 RAPGEF5Q92565 580 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 HDAC11Q96DB2 347 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 MCCC1Q96RQ3 725 aaPredicted RBP13.02□□□□□ -0.33
SUMO1-206ENST00000409368 CALN1Q9BXU9 219 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 DTLQ9NZJ0 730 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 FTSJ1Q9UET6 329 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 CSNK1G3Q9Y6M4 447 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 ACACAQ13085 2346 aa13.02□□□□□ -0.33
SUMO1-206ENST00000409368 HYAL3O43820 417 aaPredicted RBP13.01□□□□□ -0.33
SUMO1-206ENST00000409368 FZD6O60353 706 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 TOP3BO95985 862 aaKnown RBP13.01□□□□□ -0.33
SUMO1-206ENST00000409368 CAPNS1P04632 268 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 HOXC4P09017 264 aaPredicted RBP13.01□□□□□ -0.33
SUMO1-206ENST00000409368 C6P13671 934 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 GM2AP17900 193 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 SSR1P43307 286 aaKnown RBP13.01□□□□□ -0.33
SUMO1-206ENST00000409368 HNRNPKP61978 463 aaKnown RBP eCLIP13.01□□□□□ -0.33
SUMO1-206ENST00000409368 SLC10A2Q12908 348 aaPredicted RBP13.01□□□□□ -0.33
SUMO1-206ENST00000409368 ZNF211Q13398 564 aaPredicted RBP13.01□□□□□ -0.33
SUMO1-206ENST00000409368 ILKQ13418 452 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 SMAD1Q15797 465 aaKnown RBP13.01□□□□□ -0.33
SUMO1-206ENST00000409368 WSCD2Q2TBF2 565 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 LRRC73Q5JTD7 316 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 TPRG1LQ5T0D9 272 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 LIPIQ6XZB0 460 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 TMPRSS7Q7RTY8 843 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 PTAR1Q7Z6K3 402 aaPredicted RBP13.01□□□□□ -0.33
SUMO1-206ENST00000409368 PARGQ86W56 976 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 RHOT1Q8IXI2 618 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 CACTIN-AS1Q8N1I8 211 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 FAM181AQ8N9Y4 354 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 KDF1Q8NAX2 398 aaPredicted RBP13.01□□□□□ -0.33
SUMO1-206ENST00000409368 OR4C6Q8NH72 309 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 NSMCE1Q8WV22 266 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 CALR3Q96L12 384 aaKnown RBP13.01□□□□□ -0.33
SUMO1-206ENST00000409368 MYOCQ99972 504 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 NOD2Q9HC29 1040 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 KCTD5Q9NXV2 234 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 DDX56Q9NY93 547 aaKnown RBP13.01□□□□□ -0.33
SUMO1-206ENST00000409368 ASXL3Q9C0F0 2248 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 APC2O95996 2303 aa13.01□□□□□ -0.33
SUMO1-206ENST00000409368 PKD1L2Q7Z442 2459 aa13□□□□□ -0.33
SUMO1-206ENST00000409368 TMEM8BA6NDV4 472 aa13□□□□□ -0.33
SUMO1-206ENST00000409368 TMEM110-MUSTN1A8MSY1 372 aa13□□□□□ -0.33
SUMO1-206ENST00000409368 BTNL10A8MVZ5 291 aa13□□□□□ -0.33
SUMO1-206ENST00000409368 ENC1O14682 589 aa13□□□□□ -0.33
SUMO1-206ENST00000409368 SCAMP1O15126 338 aa13□□□□□ -0.33
SUMO1-206ENST00000409368 PSTPIP1O43586 416 aa13□□□□□ -0.33
SUMO1-206ENST00000409368 LDOC1O95751 146 aaPredicted RBP13□□□□□ -0.33
SUMO1-206ENST00000409368 XPAP23025 273 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms