RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 VAPBO95292 243 aa13.92□□□□□ -0.18
AFF3-202ENST00000409236 NR2F1P10589 423 aa13.92□□□□□ -0.18
AFF3-202ENST00000409236 DDR1Q08345 913 aa13.92□□□□□ -0.18
AFF3-202ENST00000409236 PPIL2Q13356 520 aa13.92□□□□□ -0.18
AFF3-202ENST00000409236 CRY1Q16526 586 aa13.92□□□□□ -0.18
AFF3-202ENST00000409236 RTL4Q6ZR62 310 aa13.92□□□□□ -0.18
AFF3-202ENST00000409236 NT5DC3Q86UY8 548 aa13.92□□□□□ -0.18
AFF3-202ENST00000409236 SEMA4DQ92854 862 aa13.92□□□□□ -0.18
AFF3-202ENST00000409236 WDR27A2RRH5 827 aa13.92□□□□□ -0.18
AFF3-202ENST00000409236 ERVV-1B6SEH8 477 aa13.92□□□□□ -0.18
AFF3-202ENST00000409236 CYP11B1P15538 503 aa13.92□□□□□ -0.18
AFF3-202ENST00000409236 KLRC1P26715 233 aa13.92□□□□□ -0.18
AFF3-202ENST00000409236 TMC7Q7Z402 723 aa13.92□□□□□ -0.18
AFF3-202ENST00000409236 TRMT11Q7Z4G4 463 aaKnown RBP13.92□□□□□ -0.18
AFF3-202ENST00000409236 IRF2BPLQ9H1B7 796 aa13.92□□□□□ -0.18
AFF3-202ENST00000409236 TNKS2Q9H2K2 1166 aa13.92□□□□□ -0.18
AFF3-202ENST00000409236 SASH3O75995 380 aa13.92□□□□□ -0.18
AFF3-202ENST00000409236 ETS2P15036 469 aa13.92□□□□□ -0.18
AFF3-202ENST00000409236 ALX1Q15699 326 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 ARL15Q9NXU5 204 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 PRAMEF1O95521 474 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 RPA1P27694 616 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 SLC34A3Q8N130 599 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 TBCBQ99426 244 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 CCNB2O95067 398 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 MGAT5BQ3V5L5 792 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 RERGQ96A58 199 aaPredicted RBP13.91□□□□□ -0.18
AFF3-202ENST00000409236 CPNE2Q96FN4 548 aaPredicted RBP13.91□□□□□ -0.18
AFF3-202ENST00000409236 LARGE1O95461 756 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 CYP2F1P24903 491 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 DNASE1L1P49184 302 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 BEND5Q7L4P6 421 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 OR6J1Q8NGC5 347 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 STAG3L4Q8TBR4 150 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 OXER1Q8TDS5 423 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 SMG7Q92540 1137 aaKnown RBP13.91□□□□□ -0.18
AFF3-202ENST00000409236 CBWD1Q9BRT8 395 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 CACNA1CQ13936 2221 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 TSTD3H0UI37 97 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 SLC7A2P52569 658 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 MFSD10Q14728 455 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 CA9Q16790 459 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 STRBPQ96SI9 672 aaKnown RBP13.91□□□□□ -0.18
AFF3-202ENST00000409236 LMTK3Q96Q04 1460 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 METP08581 1390 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 ZMYM2Q9UBW7 1377 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 GTPBP1O00178 669 aaKnown RBP13.91□□□□□ -0.18
AFF3-202ENST00000409236 SLC22A1O15245 554 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 OR10H2O60403 315 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 PCSK2P16519 638 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 TUFMP49411 452 aaKnown RBP13.91□□□□□ -0.18
AFF3-202ENST00000409236 ITGA7Q13683 1181 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 XRRA1Q6P2D8 792 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 ADGRG2Q8IZP9 1017 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 TRPS1Q9UHF7 1281 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 TDRKHQ9Y2W6 561 aaKnown RBP13.91□□□□□ -0.18
AFF3-202ENST00000409236 DAGLAQ9Y4D2 1042 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 TCOF1Q13428 1488 aaKnown RBP13.91□□□□□ -0.18
AFF3-202ENST00000409236 CRKLP46109 303 aaKnown RBP13.91□□□□□ -0.18
AFF3-202ENST00000409236 ACMSDQ8TDX5 336 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 DQX1Q8TE96 717 aaKnown RBP13.91□□□□□ -0.18
AFF3-202ENST00000409236 AENQ8WTP8 325 aaKnown RBP13.91□□□□□ -0.18
AFF3-202ENST00000409236 RNF38Q9H0F5 515 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 TBX20Q9UMR3 447 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 FKBP7Q9Y680 259 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 ANKDD1BA6NHY2 528 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 CHADO15335 359 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 MSH4O15457 936 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 TIPRLO75663 272 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 HOXC12P31275 282 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 FMR1Q06787 632 aaKnown RBP eCLIP13.91□□□□□ -0.18
AFF3-202ENST00000409236 PON3Q15166 354 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 SNX20Q7Z614 316 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 OR2L2Q8NH16 312 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 NELFAQ9H3P2 528 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 IL1RAPQ9NPH3 570 aa13.91□□□□□ -0.18
AFF3-202ENST00000409236 PTPRTO14522 1441 aa13.9□□□□□ -0.18
AFF3-202ENST00000409236 TGDSO95455 350 aa13.9□□□□□ -0.18
AFF3-202ENST00000409236 ZNF3P17036 446 aa13.9□□□□□ -0.18
AFF3-202ENST00000409236 NOS2P35228 1153 aa13.9□□□□□ -0.18
AFF3-202ENST00000409236 ATXN1P54253 815 aaKnown RBP13.9□□□□□ -0.18
AFF3-202ENST00000409236 RHOAP61586 193 aa13.9□□□□□ -0.18
AFF3-202ENST00000409236 C1QBPQ07021 282 aaKnown RBP13.9□□□□□ -0.18
AFF3-202ENST00000409236 RAD9BQ6WBX8 426 aa13.9□□□□□ -0.18
AFF3-202ENST00000409236 PTAR1Q7Z6K3 402 aaPredicted RBP13.9□□□□□ -0.18
AFF3-202ENST00000409236 FAM136AQ96C01 138 aa13.9□□□□□ -0.18
AFF3-202ENST00000409236 NUDT15Q9NV35 164 aa13.9□□□□□ -0.18
AFF3-202ENST00000409236 OR10H1Q9Y4A9 318 aa13.9□□□□□ -0.18
AFF3-202ENST00000409236 IGFALSP35858 605 aa13.9□□□□□ -0.18
AFF3-202ENST00000409236 MTHFRP42898 656 aa13.9□□□□□ -0.18
AFF3-202ENST00000409236 SH3RF3Q8TEJ3 882 aaPredicted RBP13.9□□□□□ -0.18
AFF3-202ENST00000409236 ZNF717Q9BY31 904 aaPredicted RBP13.9□□□□□ -0.18
AFF3-202ENST00000409236 SLC39A1Q9NY26 324 aa13.9□□□□□ -0.18
AFF3-202ENST00000409236 DPP3Q9NY33 737 aa13.9□□□□□ -0.18
AFF3-202ENST00000409236 CFL2Q9Y281 166 aa13.9□□□□□ -0.18
AFF3-202ENST00000409236 AIREO43918 545 aa13.9□□□□□ -0.18
AFF3-202ENST00000409236 CBLBQ13191 982 aa13.9□□□□□ -0.18
AFF3-202ENST00000409236 PFKFB4Q16877 469 aa13.9□□□□□ -0.18
AFF3-202ENST00000409236 FBXO32Q969P5 355 aa13.9□□□□□ -0.18
AFF3-202ENST00000409236 ANKHQ9HCJ1 492 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms