RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 DNAJA4Q8WW22 397 aaPredicted RBP12.21□□□□□ -0.45
SHANK2-203ENST00000409161 RERGQ96A58 199 aaPredicted RBP12.21□□□□□ -0.45
SHANK2-203ENST00000409161 CERS2Q96G23 380 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 TBC1D24Q9ULP9 559 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 PSMD13Q9UNM6 376 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 TDRKHQ9Y2W6 561 aaKnown RBP12.21□□□□□ -0.45
SHANK2-203ENST00000409161 MAP2K7O14733 419 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 ADRA1DP25100 572 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 ATG9AQ7Z3C6 839 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 PSTKQ8IV42 348 aaKnown RBP12.21□□□□□ -0.46
SHANK2-203ENST00000409161 RIT1Q92963 219 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 APOL2Q9BQE5 337 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 TAS2R7Q9NYW3 318 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 NUP50Q9UKX7 468 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 RBM7Q9Y580 266 aaKnown RBP12.21□□□□□ -0.46
SHANK2-203ENST00000409161 TULP3O75386 442 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 RBMXL2O75526 392 aaKnown RBP12.21□□□□□ -0.46
SHANK2-203ENST00000409161 CTXN3Q4LDR2 81 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 C1orf189Q5VU69 101 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 LRRC20Q8TCA0 184 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 LACRTQ9GZZ8 138 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 SLC35C2Q9NQQ7 365 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 ANKRD26Q9UPS8 1709 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 CYP27B1O15528 508 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 PCDH8O95206 1070 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 SUPT20HL2P0C7V6 817 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 RNF19BQ6ZMZ0 732 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 ATCAYQ86WG3 371 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 CREG2Q8IUH2 290 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 MGME1Q9BQP7 344 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 SEMA3GQ9NS98 782 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 PLCL2Q9UPR0 1127 aa12.21□□□□□ -0.46
SHANK2-203ENST00000409161 BCKDKO14874 412 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 TFECO14948 347 aaPredicted RBP12.2□□□□□ -0.46
SHANK2-203ENST00000409161 ATF4P18848 351 aaPredicted RBP12.2□□□□□ -0.46
SHANK2-203ENST00000409161 EPORP19235 508 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 TUBP50607 506 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 NRG3P56975 720 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 PTPAQ15257 358 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 SPATA19Q7Z5L4 167 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 TMC8Q8IU68 726 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 XPR1Q9UBH6 696 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 TSPAN16Q9UKR8 245 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 FAM205CA6NFA0 338 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 AP5Z1O43299 807 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 NPR2P20594 1047 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 ASMTP46597 345 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 BCL2L1Q07817 233 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 CWF19L1Q69YN2 538 aaKnown RBP12.2□□□□□ -0.46
SHANK2-203ENST00000409161 NEPROQ6NW34 567 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 WDR59Q6PJI9 974 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 SLC4A11Q8NBS3 891 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 GMCL1P1Q8NEA9 526 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 MROH8Q9H579 483 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 PAK6Q9NQU5 681 aaPredicted RBP12.2□□□□□ -0.46
SHANK2-203ENST00000409161 GULP1Q9UBP9 304 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 PCDHGA3Q9Y5H0 932 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 PSMD5Q16401 504 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 ZC3H7AQ8IWR0 971 aaKnown RBP12.2□□□□□ -0.46
SHANK2-203ENST00000409161 OGDHLQ9ULD0 1010 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 DAGLAQ9Y4D2 1042 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 ZNF432O94892 652 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 APOL3O95236 402 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 FGFR1P11362 822 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 FAAP100Q0VG06 881 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 ZBTB6Q15916 424 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 VPS26BQ4G0F5 336 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 PPM1LQ5SGD2 360 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 LPCAT1Q8NF37 534 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 HEXDCQ8WVB3 486 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 CELF1Q92879 486 aaKnown RBP12.2□□□□□ -0.46
SHANK2-203ENST00000409161 C2orf49Q9BVC5 232 aaPredicted RBP12.2□□□□□ -0.46
SHANK2-203ENST00000409161 ASB7Q9H672 318 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 PTTG2Q9NZH5 202 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 TFR2Q9UP52 801 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 ERBB2P04626 1255 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 PEPDP12955 493 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 CDH5P33151 784 aaPredicted RBP12.2□□□□□ -0.46
SHANK2-203ENST00000409161 GABRB2P47870 512 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 GRB10Q13322 594 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 GPAT3Q53EU6 434 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 FNBP1LQ5T0N5 605 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 STXBP5Q5T5C0 1151 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 TMEM192Q8IY95 271 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 COLGALT2Q8IYK4 626 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 GMCL1Q96IK5 515 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 NEDD4LQ96PU5 975 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 SLC12A8A0AV02 714 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 DDX3XO00571 662 aaKnown RBP eCLIP12.2□□□□□ -0.46
SHANK2-203ENST00000409161 SLC22A3O75751 556 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 CCNDBP1O95273 360 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 TMEM44Q2T9K0 475 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 GNASQ5JWF2 1037 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 TMEM86AQ8N2M4 240 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 RNF148Q8N7C7 305 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 TLR10Q9BXR5 811 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 PPLO60437 1756 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 DDX3YO15523 660 aaKnown RBP12.2□□□□□ -0.46
SHANK2-203ENST00000409161 HNF4AP41235 474 aa12.2□□□□□ -0.46
SHANK2-203ENST00000409161 FAM189A2Q15884 450 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms