RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 BOCQ9BWV1 1114 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 CALN1Q9BXU9 219 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 MAGEB5Q9BZ81 275 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 RAB6CQ9H0N0 254 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 THAP2Q9H0W7 228 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 TCEAL2Q9H3H9 227 aaPredicted RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 NHEJ1Q9H9Q4 299 aaPredicted RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 MRPL47Q9HD33 250 aaKnown RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 ANLNQ9NQW6 1124 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 ABHD10Q9NUJ1 306 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 TMEM51Q9NW97 253 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 DNAJC28Q9NX36 388 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 ARHGEF38Q9NXL2 777 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 ACSL6Q9UKU0 697 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 VANGL2Q9ULK5 521 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 HEMK1Q9Y5R4 338 aaPredicted RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 HS3ST4Q9Y661 456 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 HS3ST3A1Q9Y663 406 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 CSNK1G3Q9Y6M4 447 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 NF1P21359 2839 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 MTORP42345 2549 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 TMEM191CA6NGB0 347 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 K7ERQ8 282 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 CCP110O43303 1012 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 AQP9O43315 295 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 SMAD6O43541 496 aaKnown RBP6.29□□□□□ -1.4
RPA3-204ENST00000406109 MFAP3LO75121 409 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 RNF8O76064 485 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 NTRK1P04629 796 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 MYBL1P10243 752 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 SRCP12931 536 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 PSMA2P25787 234 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 AKT2P31751 481 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 ADRA1BP35368 520 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 NNMTP40261 264 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 MLLT3P42568 568 aaPredicted RBP6.29□□□□□ -1.4
RPA3-204ENST00000406109 PTPN9P43378 593 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 GSCP56915 257 aaPredicted RBP6.29□□□□□ -1.4
RPA3-204ENST00000406109 HNRNPKP61978 463 aaKnown RBP eCLIP6.29□□□□□ -1.4
RPA3-204ENST00000406109 OGDHQ02218 1023 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 TLE1Q04724 770 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 EIF2B5Q13144 721 aaKnown RBP6.29□□□□□ -1.4
RPA3-204ENST00000406109 UBAP2LQ14157 1087 aaKnown RBP6.29□□□□□ -1.4
RPA3-204ENST00000406109 CLCA4Q14CN2 919 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 SLC18A3Q16572 532 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 TBR1Q16650 682 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 ACCSLQ4AC99 568 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 RWDD4Q6NW29 188 aaKnown RBP6.29□□□□□ -1.4
RPA3-204ENST00000406109 FOXR1Q6PIV2 292 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 XKR5Q6UX68 686 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 STRADAQ7RTN6 431 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 BNIPLQ7Z465 357 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 SLFN11Q7Z7L1 901 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 DSG4Q86SJ6 1040 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 SLC35F3Q8IY50 421 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 TC2NQ8N9U0 490 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 SPC24Q8NBT2 197 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 CHST14Q8NCH0 376 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 TMIEQ8NEW7 156 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 TPCN2Q8NHX9 752 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 HTR3CQ8WXA8 447 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 CENPIQ92674 756 aaPredicted RBP6.29□□□□□ -1.4
RPA3-204ENST00000406109 LIN37Q96GY3 246 aaPredicted RBP6.29□□□□□ -1.4
RPA3-204ENST00000406109 PSMB7Q99436 277 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 KLF6Q99612 283 aaPredicted RBP6.29□□□□□ -1.4
RPA3-204ENST00000406109 CNPY3Q9BT09 278 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 HDAC8Q9BY41 377 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 SPTLC3Q9NUV7 552 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 MED13Q9UHV7 2174 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 SALL4Q9UJQ4 1053 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 HS3ST2Q9Y278 367 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 PCDHGA7Q9Y5G6 932 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 SCINQ9Y6U3 715 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 DNHD1Q96M86 4753 aa6.29□□□□□ -1.4
RPA3-204ENST00000406109 MAP1AP78559 2803 aaPredicted RBP6.28□□□□□ -1.4
RPA3-204ENST00000406109 CHD5Q8TDI0 1954 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 CCDC187A0A096LP49 1063 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 SSU72P8A0A1W2PR75 194 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 TCAF2A6NFQ2 919 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 DRGXA6NNA5 263 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 A6NNZ2 444 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 C1QTNF3-AMACRE9PGA6 284 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 I6L893 689 aaPredicted RBP6.28□□□□□ -1.4
RPA3-204ENST00000406109 TPP1O14773 563 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 PLD2O14939 933 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 MUSKO15146 869 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 SNAP91O60641 907 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 CNTN5O94779 1100 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 PAK4O96013 591 aaPredicted RBP6.28□□□□□ -1.4
RPA3-204ENST00000406109 CYP1A2P05177 515 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 H2AFZP0C0S5 128 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 GP1BBP13224 206 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 HGFP14210 728 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 JUNDP17535 347 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 CR2P20023 1033 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 CHRNA3P32297 505 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 UGT1A5P35504 534 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 SSR1P43307 286 aaKnown RBP6.28□□□□□ -1.4
RPA3-204ENST00000406109 HDAC4P56524 1084 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 CYP4F2P78329 520 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms