RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 SLC25A17O43808 307 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 TSPAN7P41732 249 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 DPP6P42658 865 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 ARSFP54793 590 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 RIPK4P57078 832 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 UFM1P61960 85 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 EFNB1P98172 346 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 CALD1Q05682 793 aaKnown RBP5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 MTHFSDQ2M296 383 aaKnown RBP5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 FAM180BQ6P0A1 224 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 CHD1LQ86WJ1 897 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 UNC5CLQ8IV45 518 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 ZCCHC10Q8TBK6 192 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 KCNG4Q8TDN1 519 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 ATOH1Q92858 354 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 WDR83Q9BRX9 315 aaKnown RBP5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 UBA5Q9GZZ9 404 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 UNC45AQ9H3U1 944 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 PNRC2Q9NPJ4 139 aaKnown RBP5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 ENTPD7Q9NQZ7 604 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 IRAK4Q9NWZ3 460 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 IL1RAPL1Q9NZN1 696 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 RAP2CQ9Y3L5 183 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 CLDN16Q9Y5I7 305 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 SBF2Q86WG5 1849 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 ZNF804BA4D1E1 1349 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 GAGE10A6NGK3 116 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 IFNL4K9M1U5 179 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 TSPAN4O14817 238 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 ATG13O75143 517 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 TOP3BO95985 862 aaKnown RBP5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 UNGP13051 313 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 EDN2P20800 178 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 FBLP22087 321 aaKnown RBP5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 TNFSF8P32971 234 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 DDIT3P35638 169 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 MMP13P45452 471 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 HARS2P49590 506 aaKnown RBP5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 CLCNKBP51801 687 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 MRPS21P82921 87 aaKnown RBP5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 SIM2Q14190 667 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 RABEP1Q15276 862 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 RBMS2Q15434 407 aaKnown RBP5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 INPP5JQ15735 1006 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 ETFDHQ16134 617 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 TSTQ16762 297 aaKnown RBP5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 SLC9B1Q4ZJI4 515 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 NAA35Q5VZE5 725 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 NUGGCQ68CJ6 796 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 RSRC2Q7L4I2 434 aaKnown RBP5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 R3HCC1LQ7Z5L2 792 aaKnown RBP5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 PIP4P1Q86T03 277 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 ARMC8Q8IUR7 673 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 DPP10Q8N608 796 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 NANOGP1Q8N7R0 232 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 PPHLN1Q8NEY8 458 aaKnown RBP5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 GDPD5Q8WTR4 605 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 VEZTQ9HBM0 779 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 SNTG1Q9NSN8 517 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 BABAM1Q9NWV8 329 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 HCN3Q9P1Z3 774 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 THSD7AQ9UPZ6 1657 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 CEMIPQ8WUJ3 1361 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 MAP3K5Q99683 1374 aa5.26□□□□□ -1.57
HMGB3P19-201ENST00000403971 GLI3P10071 1580 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 BRWD3Q6RI45 1802 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 ATRNO75882 1429 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 TNS2Q63HR2 1409 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 UBR2Q8IWV8 1755 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 DNAJC9-AS1A6NH13 148 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 FAM157AC9JC47 383 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 TACC1O75410 805 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 RTN3O95197 1032 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 HSP90AB1P08238 724 aaKnown RBP5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 PRF1P14222 555 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 EPHA8P29322 1005 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 EFNA5P52803 228 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 GEMIN4P57678 1058 aaKnown RBP5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 PTP4A2Q12974 167 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 TMEM71Q6P5X7 295 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 TMEM81Q6P7N7 255 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 IL20RBQ6UXL0 311 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 PRSS45Q7RTY3 260 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 FAM160B2Q86V87 743 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 HORMAD2Q8N7B1 307 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 KDM1BQ8NB78 822 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 ZNF548Q8NEK5 533 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 OR4N2Q8NGD1 307 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 RASSF8Q8NHQ8 419 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 C16orf52Q8NHV5 167 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 TMEM174Q8WUU8 243 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 UCMAQ8WVF2 138 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 RFFLQ8WZ73 363 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 SKA1Q96BD8 255 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 KRTAP4-2Q9BYR5 136 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 MAP6D1Q9H9H5 199 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 PCDHB16Q9NRJ7 776 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 CTNNAL1Q9UBT7 734 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 HSPB7Q9UBY9 170 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 AASSQ9UDR5 926 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms