RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 SEMA4BQ9NPR2 832 aaPredicted RBP9.23□□□□□ -0.93
HPS4-203ENST00000402105 EIF2B3Q9NR50 452 aaKnown RBP9.23□□□□□ -0.93
HPS4-203ENST00000402105 PAIP2BQ9ULR5 123 aaKnown RBP9.23□□□□□ -0.93
HPS4-203ENST00000402105 RBMX2Q9Y388 322 aaKnown RBP9.23□□□□□ -0.93
HPS4-203ENST00000402105 SH3BP1Q9Y3L3 701 aa9.23□□□□□ -0.93
HPS4-203ENST00000402105 COL4A5P29400 1685 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 A0A087WXM4 84 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 MYBPHLA2RUH7 354 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 BDNFP23560 247 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 FASP25445 335 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 OXTRP30559 389 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 SOX4Q06945 474 aaPredicted RBP9.22□□□□□ -0.93
HPS4-203ENST00000402105 PIGFQ07326 219 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 PMS2P3Q13401 168 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 ADRM1Q16186 407 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 TMEM214Q6NUQ4 689 aaKnown RBP9.22□□□□□ -0.93
HPS4-203ENST00000402105 PKN3Q6P5Z2 889 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 CLEC14AQ86T13 490 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 RALGPS2Q86X27 583 aaPredicted RBP9.22□□□□□ -0.93
HPS4-203ENST00000402105 CLEC4FQ8N1N0 589 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 PCYOX1LQ8NBM8 494 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 DNAJB3Q8WWF6 145 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 CENPIQ92674 756 aaPredicted RBP9.22□□□□□ -0.93
HPS4-203ENST00000402105 C3orf30Q96M34 536 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 TMEM74Q96NL1 305 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 TCF12Q99081 682 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 BRD8Q9H0E9 1235 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 PLGRKTQ9HBL7 147 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 UTP6Q9NYH9 597 aaKnown RBP9.22□□□□□ -0.93
HPS4-203ENST00000402105 USP22Q9UPT9 525 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.22□□□□□ -0.93
HPS4-203ENST00000402105 MAGEB16A2A368 324 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 A8MT66 165 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 PTGES3LE9PB15 166 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 TOR1BO14657 336 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 ZNF189O75820 626 aaPredicted RBP9.22□□□□□ -0.93
HPS4-203ENST00000402105 CD247P20963 164 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 UGT1A1P22309 533 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 UGT1A4P22310 534 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 UGT1A3P35503 534 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 UGT1A5P35504 534 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 EMP3P54852 163 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 APOFQ13790 326 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 NFYCQ13952 458 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 INPP5AQ14642 412 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 PCID2Q5JVF3 399 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 AGAP9Q5VTM2 703 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 KCTD8Q6ZWB6 473 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 PIWIL4Q7Z3Z4 852 aaKnown RBP9.22□□□□□ -0.93
HPS4-203ENST00000402105 FNDC8Q8TC99 324 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 ANKRD49Q8WVL7 239 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 CCDC138Q96M89 665 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 OLFM1Q99784 485 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 SLC25A23Q9BV35 468 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 COLEC11Q9BWP8 271 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 ZFYVE28Q9HCC9 887 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 TRNAU1APQ9NX07 287 aaKnown RBP9.22□□□□□ -0.93
HPS4-203ENST00000402105 SLC8A2Q9UPR5 921 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 FADS3Q9Y5Q0 445 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 LRRC37AA6NMS7 1700 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 DCLK1O15075 740 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 DYNC1LI2O43237 492 aaPredicted RBP9.22□□□□□ -0.93
HPS4-203ENST00000402105 IPO13O94829 963 aaKnown RBP9.22□□□□□ -0.93
HPS4-203ENST00000402105 HGFP14210 728 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 EEF1DP29692 281 aaKnown RBP9.22□□□□□ -0.93
HPS4-203ENST00000402105 SLC7A1P30825 629 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 CARTPTQ16568 116 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 IMPG1Q17R60 797 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 ZNF484Q5JVG2 852 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 BTBD8Q5XKL5 378 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 SLC27A1Q6PCB7 646 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 CAMK1DQ8IU85 385 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 SNX29P2Q8IUI4 249 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 OR2T34Q8NGX1 318 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 OR2T3Q8NH03 318 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 HSFY1Q96LI6 401 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 TEKT5Q96M29 485 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 MRPL57Q9BQC6 102 aaKnown RBP9.22□□□□□ -0.93
HPS4-203ENST00000402105 DUSP16Q9BY84 665 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 EPB41L1Q9H4G0 881 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 SARS2Q9NP81 518 aaKnown RBP9.22□□□□□ -0.93
HPS4-203ENST00000402105 NT5MQ9NPB1 228 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 UBQLN1Q9UMX0 589 aaKnown RBP9.22□□□□□ -0.93
HPS4-203ENST00000402105 ANKRD6Q9Y2G4 727 aa9.22□□□□□ -0.93
HPS4-203ENST00000402105 CASTOR2A6NHX0 329 aa9.21□□□□□ -0.93
HPS4-203ENST00000402105 SNAP29O95721 258 aa9.21□□□□□ -0.93
HPS4-203ENST00000402105 PAMP19021 973 aa9.21□□□□□ -0.93
HPS4-203ENST00000402105 ELK4P28324 431 aa9.21□□□□□ -0.93
HPS4-203ENST00000402105 GRM5P41594 1212 aa9.21□□□□□ -0.93
HPS4-203ENST00000402105 MERTKQ12866 999 aa9.21□□□□□ -0.93
HPS4-203ENST00000402105 GRB7Q14451 532 aa9.21□□□□□ -0.93
HPS4-203ENST00000402105 SQLEQ14534 574 aa9.21□□□□□ -0.93
HPS4-203ENST00000402105 CLEC20AQ6ZU45 233 aa9.21□□□□□ -0.93
HPS4-203ENST00000402105 UNC93AQ86WB7 457 aa9.21□□□□□ -0.93
HPS4-203ENST00000402105 BLOC1S5Q8TDH9 187 aa9.21□□□□□ -0.93
HPS4-203ENST00000402105 NSUN5Q96P11 429 aaKnown RBP9.21□□□□□ -0.93
HPS4-203ENST00000402105 C1QTNF1Q9BXJ1 281 aa9.21□□□□□ -0.93
HPS4-203ENST00000402105 MUC3BQ9H195 1237 aa9.21□□□□□ -0.93
HPS4-203ENST00000402105 AKTIPQ9H8T0 292 aa9.21□□□□□ -0.93
HPS4-203ENST00000402105 VRTNQ9H8Y1 702 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms