RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 PPM1JQ5JR12 505 aa25.77■■□□□ 1.72
CPNE1-205ENST00000401607 HDAC10Q969S8 669 aa25.77■■□□□ 1.72
CPNE1-205ENST00000401607 DNAJC1Q96KC8 554 aaKnown RBP25.77■■□□□ 1.72
CPNE1-205ENST00000401607 VPS11Q9H270 941 aa25.77■■□□□ 1.72
CPNE1-205ENST00000401607 CAB39LQ9H9S4 337 aa25.77■■□□□ 1.72
CPNE1-205ENST00000401607 FGFR1OP2Q9NVK5 253 aa25.77■■□□□ 1.72
CPNE1-205ENST00000401607 GGA2Q9UJY4 613 aa25.77■■□□□ 1.72
CPNE1-205ENST00000401607 AURKAO14965 403 aa25.77■■□□□ 1.72
CPNE1-205ENST00000401607 SRCP12931 536 aa25.77■■□□□ 1.72
CPNE1-205ENST00000401607 STK19P49842 368 aaPredicted RBP25.77■■□□□ 1.72
CPNE1-205ENST00000401607 RARS2Q5T160 578 aaKnown RBP25.77■■□□□ 1.72
CPNE1-205ENST00000401607 METTL3Q86U44 580 aaKnown RBP25.77■■□□□ 1.72
CPNE1-205ENST00000401607 NPAS3Q8IXF0 933 aa25.77■■□□□ 1.72
CPNE1-205ENST00000401607 OR13C4Q8NGS5 318 aa25.77■■□□□ 1.72
CPNE1-205ENST00000401607 RPL10LQ96L21 214 aaKnown RBP25.77■■□□□ 1.72
CPNE1-205ENST00000401607 MFSD1Q9H3U5 465 aa25.77■■□□□ 1.72
CPNE1-205ENST00000401607 DZANK1Q9NVP4 752 aa25.77■■□□□ 1.72
CPNE1-205ENST00000401607 FBXO5Q9UKT4 447 aa25.77■■□□□ 1.72
CPNE1-205ENST00000401607 WDR91A4D1P6 747 aa25.76■■□□□ 1.71
CPNE1-205ENST00000401607 ANKRD66B4E2M5 251 aa25.76■■□□□ 1.71
CPNE1-205ENST00000401607 SLC9A3R1O14745 358 aaPredicted RBP25.76■■□□□ 1.71
CPNE1-205ENST00000401607 GLP2RO95838 553 aa25.76■■□□□ 1.71
CPNE1-205ENST00000401607 PABPC1P11940 636 aaKnown RBP25.76■■□□□ 1.71
CPNE1-205ENST00000401607 CSNK1DP48730 415 aa25.76■■□□□ 1.71
CPNE1-205ENST00000401607 CSRP3P50461 194 aa25.76■■□□□ 1.71
CPNE1-205ENST00000401607 ZKSCAN8Q15776 578 aaPredicted RBP25.76■■□□□ 1.71
CPNE1-205ENST00000401607 DGKKQ5KSL6 1271 aa25.76■■□□□ 1.71
CPNE1-205ENST00000401607 MDGA1Q8NFP4 955 aa25.76■■□□□ 1.71
CPNE1-205ENST00000401607 OR6K2Q8NGY2 324 aa25.76■■□□□ 1.71
CPNE1-205ENST00000401607 CALML6Q8TD86 181 aa25.76■■□□□ 1.71
CPNE1-205ENST00000401607 PDCD6IPQ8WUM4 868 aaKnown RBP25.76■■□□□ 1.71
CPNE1-205ENST00000401607 MRPL38Q96DV4 380 aaKnown RBP25.76■■□□□ 1.71
CPNE1-205ENST00000401607 TBATAQ96M53 351 aa25.76■■□□□ 1.71
CPNE1-205ENST00000401607 ADGRE3Q9BY15 652 aa25.76■■□□□ 1.71
CPNE1-205ENST00000401607 IGFLR1Q9H665 355 aa25.76■■□□□ 1.71
CPNE1-205ENST00000401607 EVLQ9UI08 416 aaPredicted RBP25.76■■□□□ 1.71
CPNE1-205ENST00000401607 HS3ST2Q9Y278 367 aa25.76■■□□□ 1.71
CPNE1-205ENST00000401607 GLRA3O75311 464 aa25.75■■□□□ 1.71
CPNE1-205ENST00000401607 SLC8A1P32418 973 aa25.75■■□□□ 1.71
CPNE1-205ENST00000401607 GMPRP36959 345 aa25.75■■□□□ 1.71
CPNE1-205ENST00000401607 VIPR2P41587 438 aa25.75■■□□□ 1.71
CPNE1-205ENST00000401607 SERPINB4P48594 390 aa25.75■■□□□ 1.71
CPNE1-205ENST00000401607 ZNF140P52738 457 aaPredicted RBP25.75■■□□□ 1.71
CPNE1-205ENST00000401607 TMPRSS15P98073 1019 aa25.75■■□□□ 1.71
CPNE1-205ENST00000401607 DLG2Q15700 870 aa25.75■■□□□ 1.71
CPNE1-205ENST00000401607 KIAA0408Q6ZU52 694 aa25.75■■□□□ 1.71
CPNE1-205ENST00000401607 PIGWQ7Z7B1 504 aa25.75■■□□□ 1.71
CPNE1-205ENST00000401607 STYXQ8WUJ0 223 aa25.75■■□□□ 1.71
CPNE1-205ENST00000401607 NSRP1Q9H0G5 558 aaKnown RBP25.75■■□□□ 1.71
CPNE1-205ENST00000401607 TNKS2Q9H2K2 1166 aa25.75■■□□□ 1.71
CPNE1-205ENST00000401607 CDH22Q9UJ99 828 aa25.75■■□□□ 1.71
CPNE1-205ENST00000401607 OR51F1A6NGY5 319 aa25.74■■□□□ 1.71
CPNE1-205ENST00000401607 PRAMEP78395 509 aa25.74■■□□□ 1.71
CPNE1-205ENST00000401607 FAM78AQ5JUQ0 283 aa25.74■■□□□ 1.71
CPNE1-205ENST00000401607 GLT6D1Q7Z4J2 308 aa25.74■■□□□ 1.71
CPNE1-205ENST00000401607 PTAR1Q7Z6K3 402 aaPredicted RBP25.74■■□□□ 1.71
CPNE1-205ENST00000401607 MFSD6LQ8IWD5 586 aa25.74■■□□□ 1.71
CPNE1-205ENST00000401607 ZNF557Q8N988 423 aaPredicted RBP25.74■■□□□ 1.71
CPNE1-205ENST00000401607 ARMC2Q8NEN0 867 aa25.74■■□□□ 1.71
CPNE1-205ENST00000401607 OR6P1Q8NGX9 317 aa25.74■■□□□ 1.71
CPNE1-205ENST00000401607 LRRC8CQ8TDW0 803 aa25.74■■□□□ 1.71
CPNE1-205ENST00000401607 ZNF75CPQ92670 426 aaPredicted RBP25.74■■□□□ 1.71
CPNE1-205ENST00000401607 APOL5Q9BWW9 433 aa25.74■■□□□ 1.71
CPNE1-205ENST00000401607 EMCNQ9ULC0 261 aa25.74■■□□□ 1.71
CPNE1-205ENST00000401607 RPP40O75818 363 aaKnown RBP25.74■■□□□ 1.71
CPNE1-205ENST00000401607 CRTAMO95727 393 aa25.74■■□□□ 1.71
CPNE1-205ENST00000401607 FSHRP23945 695 aa25.74■■□□□ 1.71
CPNE1-205ENST00000401607 HADHAP40939 763 aa25.74■■□□□ 1.71
CPNE1-205ENST00000401607 CD151P48509 253 aa25.74■■□□□ 1.71
CPNE1-205ENST00000401607 TAF1AQ15573 450 aaPredicted RBP25.74■■□□□ 1.71
CPNE1-205ENST00000401607 KIAA0907Q7Z7F0 614 aaPredicted RBP25.74■■□□□ 1.71
CPNE1-205ENST00000401607 ADIPOR2Q86V24 386 aa25.74■■□□□ 1.71
CPNE1-205ENST00000401607 CAMK1DQ8IU85 385 aa25.74■■□□□ 1.71
CPNE1-205ENST00000401607 KIAA1958Q8N8K9 716 aa25.74■■□□□ 1.71
CPNE1-205ENST00000401607 SUDS3Q9H7L9 328 aaPredicted RBP25.74■■□□□ 1.71
CPNE1-205ENST00000401607 FBXO6Q9NRD1 293 aaPredicted RBP25.74■■□□□ 1.71
CPNE1-205ENST00000401607 MARCH4Q9P2E8 410 aaPredicted RBP25.74■■□□□ 1.71
CPNE1-205ENST00000401607 SLC39A10Q9ULF5 831 aa25.74■■□□□ 1.71
CPNE1-205ENST00000401607 PCDHB9Q9Y5E1 797 aa25.74■■□□□ 1.71
CPNE1-205ENST00000401607 RANBP2P49792 3224 aaKnown RBP25.73■■□□□ 1.71
CPNE1-205ENST00000401607 HAUS5O94927 633 aa25.73■■□□□ 1.71
CPNE1-205ENST00000401607 MPOP05164 745 aa25.73■■□□□ 1.71
CPNE1-205ENST00000401607 PSMA3P25788 255 aa25.73■■□□□ 1.71
CPNE1-205ENST00000401607 PTPRRQ15256 657 aa25.73■■□□□ 1.71
CPNE1-205ENST00000401607 DHCR24Q15392 516 aa25.73■■□□□ 1.71
CPNE1-205ENST00000401607 ZNF789Q5FWF6 425 aa25.73■■□□□ 1.71
CPNE1-205ENST00000401607 GKAP1Q5VSY0 366 aaPredicted RBP25.73■■□□□ 1.71
CPNE1-205ENST00000401607 GPR149Q86SP6 731 aa25.73■■□□□ 1.71
CPNE1-205ENST00000401607 CILP2Q8IUL8 1156 aa25.73■■□□□ 1.71
CPNE1-205ENST00000401607 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.73■■□□□ 1.71
CPNE1-205ENST00000401607 OSCP1Q8WVF1 389 aa25.73■■□□□ 1.71
CPNE1-205ENST00000401607 FGF13Q92913 245 aa25.73■■□□□ 1.71
CPNE1-205ENST00000401607 VOPP1Q96AW1 172 aa25.73■■□□□ 1.71
CPNE1-205ENST00000401607 MYO19Q96H55 970 aa25.73■■□□□ 1.71
CPNE1-205ENST00000401607 SEC16BQ96JE7 1060 aa25.73■■□□□ 1.71
CPNE1-205ENST00000401607 ASB16Q96NS5 453 aa25.73■■□□□ 1.71
CPNE1-205ENST00000401607 NLE1Q9NVX2 485 aaPredicted RBP25.73■■□□□ 1.71
CPNE1-205ENST00000401607 DUS2Q9NX74 493 aaKnown RBP25.73■■□□□ 1.71
CPNE1-205ENST00000401607 DCDC2Q9UHG0 476 aa25.73■■□□□ 1.71
CPNE1-205ENST00000401607 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms