RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 FGD2Q7Z6J4 655 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 ADHFE1Q8IWW8 467 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 NKD2Q969F2 451 aaPredicted RBP18.27■□□□□ 0.52
COL18A1-204ENST00000400337 RCN3Q96D15 328 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 COPS8Q99627 209 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 KRT36O76013 467 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 KRT75O95678 551 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 FTH1P02794 183 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 OR8H2Q8N162 312 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 COPG1Q9Y678 874 aaKnown RBP18.27■□□□□ 0.52
COL18A1-204ENST00000400337 KLRG2A4D1S0 409 aaPredicted RBP18.27■□□□□ 0.51
COL18A1-204ENST00000400337 GUCY1B2O75343 617 aa18.27■□□□□ 0.51
COL18A1-204ENST00000400337 C2P06681 752 aa18.27■□□□□ 0.51
COL18A1-204ENST00000400337 BPGMP07738 259 aa18.27■□□□□ 0.51
COL18A1-204ENST00000400337 TPSB2P20231 275 aa18.27■□□□□ 0.51
COL18A1-204ENST00000400337 SPIDRQ14159 915 aa18.27■□□□□ 0.51
COL18A1-204ENST00000400337 TPSAB1Q15661 275 aa18.27■□□□□ 0.51
COL18A1-204ENST00000400337 IRGCQ6NXR0 463 aa18.27■□□□□ 0.51
COL18A1-204ENST00000400337 APTXQ7Z2E3 356 aaKnown RBP18.27■□□□□ 0.51
COL18A1-204ENST00000400337 LUZP2Q86TE4 346 aa18.27■□□□□ 0.51
COL18A1-204ENST00000400337 COL26A1Q96A83 441 aa18.27■□□□□ 0.51
COL18A1-204ENST00000400337 PAPOLBQ9NRJ5 636 aaKnown RBP18.27■□□□□ 0.51
COL18A1-204ENST00000400337 IGFBP4P22692 258 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 NTSP30990 170 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 FEN1P39748 380 aaKnown RBP18.26■□□□□ 0.51
COL18A1-204ENST00000400337 XKR6Q5GH73 641 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 INTS6LQ5JSJ4 861 aaKnown RBP18.26■□□□□ 0.51
COL18A1-204ENST00000400337 HLA-DQA1Q5Y7H0 255 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 TXNDC11Q6PKC3 985 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 CAMK1DQ8IU85 385 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 ZFRQ96KR1 1074 aaKnown RBP18.26■□□□□ 0.51
COL18A1-204ENST00000400337 CTSEP14091 401 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 NAA20P61599 178 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 GPR156Q8NFN8 814 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 DQX1Q8TE96 717 aaKnown RBP18.26■□□□□ 0.51
COL18A1-204ENST00000400337 MRPL48Q96GC5 212 aaKnown RBP18.26■□□□□ 0.51
COL18A1-204ENST00000400337 LRMDAQ9H2I8 198 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 PCDH12Q9NPG4 1184 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 DMAC2Q9NW81 257 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 NOCTQ9UK39 431 aaKnown RBP18.26■□□□□ 0.51
COL18A1-204ENST00000400337 CLDN11O75508 207 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 HNF4AP41235 474 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 RHBDF2Q6PJF5 856 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 EPHX4Q8IUS5 362 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 CLYBLQ8N0X4 340 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 NLGN2Q8NFZ4 835 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 CDH19Q9H159 772 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 KLHL3Q9UH77 587 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 STXBP5LQ9Y2K9 1186 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 A0A088AWK7 358 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 ZNF10P21506 573 aaPredicted RBP18.26■□□□□ 0.51
COL18A1-204ENST00000400337 MAPK10P53779 464 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 RBFAQ8N0V3 343 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 CCDC185Q8N715 623 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 NAT16Q8N8M0 369 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 MIEF2Q96C03 454 aa18.26■□□□□ 0.51
COL18A1-204ENST00000400337 DDX18Q9NVP1 670 aaKnown RBP18.26■□□□□ 0.51
COL18A1-204ENST00000400337 BCLAF3A2AJT9 711 aaKnown RBP18.25■□□□□ 0.51
COL18A1-204ENST00000400337 FAM47E-STBD1D6RA91 191 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 DUSP11O75319 330 aaKnown RBP18.25■□□□□ 0.51
COL18A1-204ENST00000400337 PAICSP22234 425 aaKnown RBP18.25■□□□□ 0.51
COL18A1-204ENST00000400337 CXCR2P25025 360 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 SEMA5AQ13591 1074 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 FASTKD3Q14CZ7 662 aaKnown RBP18.25■□□□□ 0.51
COL18A1-204ENST00000400337 ARMCX4Q5H9R4 360 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 GATAD2AQ86YP4 633 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 CHRAC1Q9NRG0 131 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 CHRNB2P17787 502 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 ADSSP30520 456 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 GLUD2P49448 558 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 PRKG2Q13237 762 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 KRR1Q13601 381 aaKnown RBP18.25■□□□□ 0.51
COL18A1-204ENST00000400337 FBXW8Q8N3Y1 598 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 AHCYL2Q96HN2 611 aaKnown RBP18.25■□□□□ 0.51
COL18A1-204ENST00000400337 E9PAM4 449 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 UBXN8O00124 270 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 TRIM38O00635 465 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 GTF2E2P29084 291 aaKnown RBP18.25■□□□□ 0.51
COL18A1-204ENST00000400337 SMARCB1Q12824 385 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 QPCTQ16769 361 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 DGKKQ5KSL6 1271 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.25■□□□□ 0.51
COL18A1-204ENST00000400337 ZNF605Q86T29 641 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 PYROXD2Q8N2H3 581 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 BRD9Q9H8M2 597 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 CFAP97Q9P2B7 532 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 QSOX1O00391 747 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 SELPP16109 830 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 PTDSS1P48651 473 aaKnown RBP18.25■□□□□ 0.51
COL18A1-204ENST00000400337 LILRA4P59901 499 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 KIAA1324Q6UXG2 1013 aaKnown RBP18.25■□□□□ 0.51
COL18A1-204ENST00000400337 RBM23Q86U06 439 aaKnown RBP18.25■□□□□ 0.51
COL18A1-204ENST00000400337 SNX27Q96L92 541 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 MAF1Q9H063 256 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 PLLPQ9Y342 182 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 GPSM3Q9Y4H4 160 aa18.25■□□□□ 0.51
COL18A1-204ENST00000400337 SNUPNO95149 360 aaKnown RBP18.24■□□□□ 0.51
COL18A1-204ENST00000400337 NUDT14O95848 222 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 EPORP19235 508 aa18.24■□□□□ 0.51
COL18A1-204ENST00000400337 TAF5Q15542 800 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms