RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 ARRDC4Q8NCT1 418 aa18.64■□□□□ 0.57
USP48-204ENST00000400301 NSMCE2Q96MF7 247 aa18.64■□□□□ 0.57
USP48-204ENST00000400301 MIPEPQ99797 713 aa18.64■□□□□ 0.57
USP48-204ENST00000400301 CLIC5Q9NZA1 410 aa18.64■□□□□ 0.57
USP48-204ENST00000400301 MOCS1Q9NZB8 636 aa18.64■□□□□ 0.57
USP48-204ENST00000400301 POLG2Q9UHN1 485 aa18.64■□□□□ 0.57
USP48-204ENST00000400301 AP4B1Q9Y6B7 739 aa18.64■□□□□ 0.57
USP48-204ENST00000400301 CCDC154A6NI56 674 aa18.64■□□□□ 0.57
USP48-204ENST00000400301 KCNU1A8MYU2 1149 aa18.64■□□□□ 0.57
USP48-204ENST00000400301 SMNDC1O75940 238 aaKnown RBP eCLIP18.64■□□□□ 0.57
USP48-204ENST00000400301 FGF1P05230 155 aa18.64■□□□□ 0.57
USP48-204ENST00000400301 HCAR3P49019 387 aa18.64■□□□□ 0.57
USP48-204ENST00000400301 OTUD3Q5T2D3 398 aaPredicted RBP18.64■□□□□ 0.57
USP48-204ENST00000400301 TRMOQ9BU70 441 aa18.64■□□□□ 0.57
USP48-204ENST00000400301 NMRK2Q9NPI5 230 aa18.64■□□□□ 0.57
USP48-204ENST00000400301 PPM1HQ9ULR3 514 aa18.64■□□□□ 0.57
USP48-204ENST00000400301 MTF2Q9Y483 593 aaPredicted RBP18.64■□□□□ 0.57
USP48-204ENST00000400301 AZIN1O14977 448 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 TBC1D4O60343 1298 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 AMHP03971 560 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 SLC2A4P14672 509 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 AOC1P19801 751 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 HLA-DPA1P20036 260 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 GRK4P32298 578 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 SLC1A2P43004 574 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 FLT3LGP49771 235 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 CDC16Q13042 620 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 GRB14Q14449 540 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 HS6ST3Q8IZP7 471 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 PHTF2Q8N3S3 785 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 OR4L1Q8NH43 312 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 FCRL5Q96RD9 977 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 FTHL17Q9BXU8 183 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 OXSMQ9NWU1 459 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 TCRBV5S1A1TA0A578 114 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 C16orf96A6NNT2 1141 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 CCNT2O60583 730 aaKnown RBP18.63■□□□□ 0.57
USP48-204ENST00000400301 FGF3P11487 239 aaPredicted RBP18.63■□□□□ 0.57
USP48-204ENST00000400301 RHOQP17081 205 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 VCLP18206 1134 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 PRDX6P30041 224 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 CCNFP41002 786 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 FAM126BQ8IXS8 530 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 PLD6Q8N2A8 252 aaKnown RBP18.63■□□□□ 0.57
USP48-204ENST00000400301 BTN2A3PQ96KV6 586 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 MLPHQ9BV36 600 aaPredicted RBP18.63■□□□□ 0.57
USP48-204ENST00000400301 ADAMTS10Q9H324 1103 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 DDX18Q9NVP1 670 aaKnown RBP18.63■□□□□ 0.57
USP48-204ENST00000400301 ZNF197O14709 1029 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 NRP2O60462 931 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 FCGR1AP12314 374 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 ABL2P42684 1182 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 CCNG1P51959 295 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 PGAM4Q8N0Y7 254 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 RTP4Q96DX8 246 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 ZFRQ96KR1 1074 aaKnown RBP18.63■□□□□ 0.57
USP48-204ENST00000400301 MYO1GB0I1T2 1018 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 PFKMP08237 780 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 T-ENOLP0DO92 83 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 POLD2P49005 469 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 XIAPP98170 497 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 RALGDSQ12967 914 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 MTA1Q13330 715 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 HNRNPDQ14103 355 aaKnown RBP18.63■□□□□ 0.57
USP48-204ENST00000400301 CNSTQ6PJW8 725 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 DNAJB14Q8TBM8 379 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 MPP4Q96JB8 637 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 PANX3Q96QZ0 392 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 BPIFA1Q9NP55 256 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 STK39Q9UEW8 545 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 LRRC42Q9Y546 428 aa18.63■□□□□ 0.57
USP48-204ENST00000400301 ASGR1P07306 291 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 IL4RP24394 825 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 ETV4P43268 484 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 RAP1GDS1P52306 607 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 DDX39BQ13838 428 aaKnown RBP18.62■□□□□ 0.57
USP48-204ENST00000400301 CLEC6AQ6EIG7 209 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 ANO7Q6IWH7 933 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 RSPH1Q8WYR4 309 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 HMCESQ96FZ2 354 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 BLOC1S6Q9UL45 172 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 PCDHGB4Q9UN71 923 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 MYRFQ9Y2G1 1151 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 CFAP99D6REC4 459 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 CLOCKO15516 846 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 FKBP9O95302 570 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 HTR7P34969 479 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 GMPRP36959 345 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 TSTD2Q5T7W7 516 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 DNAJC14Q6Y2X3 702 aaPredicted RBP18.62■□□□□ 0.57
USP48-204ENST00000400301 FRMD7Q6ZUT3 714 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 FKBP9P1Q75LS8 142 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 ZC3HC1Q86WB0 502 aaKnown RBP18.62■□□□□ 0.57
USP48-204ENST00000400301 TP53INP2Q8IXH6 220 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 NKAPQ8N5F7 415 aaKnown RBP18.62■□□□□ 0.57
USP48-204ENST00000400301 KBTBD7Q8WVZ9 684 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 NT5C1B-RDH14C9J2C7 533 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 VPS4BO75351 444 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 AHSGP02765 367 aa18.62■□□□□ 0.57
USP48-204ENST00000400301 ZNF7P17097 686 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms