RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 PPCSQ9HAB8 311 aa6.9□□□□□ -1.31
USP16-203ENST00000399975 ANKRD66B4E2M5 251 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 SIN3BO75182 1162 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 TCEA3O75764 348 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 USP1O94782 785 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 ALDH1A2O94788 518 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 CTSLP07711 333 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 NUDT17P0C025 328 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 CHRNB1P11230 501 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 NFKBIAP25963 317 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 GRIA1P42261 906 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 PTPN5P54829 565 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 POLR2LP62875 67 aaKnown RBP6.89□□□□□ -1.31
USP16-203ENST00000399975 PDE1BQ01064 536 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 ILF2Q12905 390 aaKnown RBP6.89□□□□□ -1.31
USP16-203ENST00000399975 PDIA2Q13087 525 aaKnown RBP6.89□□□□□ -1.31
USP16-203ENST00000399975 FZD5Q13467 585 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 SPARCL1Q14515 664 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 PKN3Q6P5Z2 889 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 NDUFAF2Q8N183 169 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 CBARPQ8N350 705 aaPredicted RBP6.89□□□□□ -1.31
USP16-203ENST00000399975 ZNF513Q8N8E2 541 aaPredicted RBP6.89□□□□□ -1.31
USP16-203ENST00000399975 CHST14Q8NCH0 376 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 BRSK1Q8TDC3 778 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 CLDN23Q96B33 292 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 TMEM109Q9BVC6 243 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 SAYSD1Q9NPB0 183 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 ARHGEF3Q9NR81 526 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 NINJ2Q9NZG7 142 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 SCML1Q9UN30 329 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 TCAF1Q9Y4C2 921 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 REV3LO60673 3130 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 PLXNA2O75051 1894 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 A0A0J9YYE9 177 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 HEATR9A2RTY3 570 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 CAPN8A6NHC0 703 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 C10orf142B7Z368 130 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 ADH1BP00325 375 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 TRBC1P01850 177 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 ZBTB16Q05516 673 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 NAB1Q13506 487 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 RASA2Q15283 850 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 TAF1AQ15573 450 aaPredicted RBP6.89□□□□□ -1.31
USP16-203ENST00000399975 ACCSLQ4AC99 568 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 IER5LQ5T953 404 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 FAM46CQ5VWP2 391 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 SDE2Q6IQ49 451 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 LRIG3Q6UXM1 1119 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 SERPINA13PQ6UXR4 307 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 GSPT2Q8IYD1 628 aaKnown RBP6.89□□□□□ -1.31
USP16-203ENST00000399975 IL17RCQ8NAC3 791 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 OR2T3Q8NH03 318 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 RAB7BQ96AH8 199 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 STAMBPL1Q96FJ0 436 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 HINFPQ9BQA5 517 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 TM6SF2Q9BZW4 377 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 CDC42EP4Q9H3Q1 356 aaKnown RBP6.89□□□□□ -1.31
USP16-203ENST00000399975 PLAC1Q9HBJ0 212 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 TREX1Q9NSU2 369 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 UBP1Q9NZI7 540 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 NFKBIL1Q9UBC1 381 aaPredicted RBP6.89□□□□□ -1.31
USP16-203ENST00000399975 MMP17Q9ULZ9 603 aa6.89□□□□□ -1.31
USP16-203ENST00000399975 PLXND1Q9Y4D7 1925 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 KANSL1LA0AUZ9 987 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 TTC24A2A3L6 582 aaPredicted RBP6.88□□□□□ -1.31
USP16-203ENST00000399975 RGSL1A5PLK6 1076 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 C1QTNF3-AMACRE9PGA6 284 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 SLC7A4O43246 635 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 RIPK2O43353 540 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 AP1G1O43747 822 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 ADAM23O75077 832 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 MGAT1P26572 445 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 ELK3P41970 407 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 TNNT3P45378 269 aaPredicted RBP6.88□□□□□ -1.31
USP16-203ENST00000399975 RPS9P46781 194 aaKnown RBP6.88□□□□□ -1.31
USP16-203ENST00000399975 COPAP53621 1224 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 UAP1Q16222 522 aaPredicted RBP6.88□□□□□ -1.31
USP16-203ENST00000399975 TMEM52BQ4KMG9 183 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 ALS2CLQ60I27 953 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 CAMK1DQ8IU85 385 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 IGDCC3Q8IVU1 814 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 STK40Q8N2I9 435 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 TTC30BQ8N4P2 665 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 PPHLN1Q8NEY8 458 aaKnown RBP6.88□□□□□ -1.31
USP16-203ENST00000399975 PYROXD1Q8WU10 500 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 SCRN2Q96FV2 425 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 PPP1R16AQ96I34 528 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 EXOC2Q96KP1 924 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 CHRDQ9H2X0 955 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 LTB4R2Q9NPC1 389 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 GEMIN8Q9NWZ8 242 aaKnown RBP6.88□□□□□ -1.31
USP16-203ENST00000399975 SYBUQ9NX95 663 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 CACNA2D2Q9NY47 1150 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 MOCS1Q9NZB8 636 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 CHKBQ9Y259 395 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 TTLL3Q9Y4R7 772 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 PCDHGC4Q9Y5F7 938 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 FAM169AQ9Y6X4 670 aa6.88□□□□□ -1.31
USP16-203ENST00000399975 LAMA2P24043 3122 aaKnown RBP6.88□□□□□ -1.31
USP16-203ENST00000399975 A0A1W2PQF6 199 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms