RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 CYP2C18P33260 490 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 ATP13A4Q4VNC1 1196 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 BICRALQ6AI39 1079 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 POP5Q969H6 163 aaKnown RBP12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 ASAH2Q9NR71 780 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 TMPRSS4Q9NRS4 437 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 KBTBD4Q9NVX7 518 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 ARHGAP20Q9P2F6 1191 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 KLF15Q9UIH9 416 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 WBP11Q9Y2W2 641 aaKnown RBP12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 E5RJQ4 531 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 H0Y858 1186 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 USP12O75317 370 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 KDELR1P24390 212 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 TGFB2P61812 414 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 HECTD3Q5T447 861 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 TCEAL6Q6IPX3 200 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 LLGL2Q6P1M3 1020 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 DENND1CQ8IV53 801 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 KATNAL2Q8IYT4 538 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 SYTL5Q8TDW5 730 aaPredicted RBP12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 ZNF483Q8TF39 744 aaPredicted RBP12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 STOML2Q9UJZ1 356 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 TMX2Q9Y320 296 aa12.37□□□□□ -0.43
CACNA1C-219ENST00000399649 TRPM1Q7Z4N2 1603 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 CNTNAP4Q9C0A0 1308 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 G3V2T6 193 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 TP73O15350 636 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 ULK1O75385 1050 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 UGT2B17O75795 530 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 SLC6A2P23975 617 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 ITPKBP27987 946 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 HNF4AP41235 474 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 ALDH5A1P51649 535 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 ZNF844Q08AG5 666 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 PDK3Q15120 406 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 BEND5Q7L4P6 421 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 TTC7BQ86TV6 843 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 TSEN15Q8WW01 171 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 RNF31Q96EP0 1072 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 C3orf14Q9HBI5 128 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 GDF3Q9NR23 364 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 MANSC4A6NHS7 340 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 WRBO00258 174 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 LCA5LO95447 670 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 RLN1P04808 185 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 TBC1D25Q3MII6 688 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 FAM46CQ5VWP2 391 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 DNAAF5Q86Y56 855 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 ELMO3Q96BJ8 720 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 FCRL4Q96PJ5 515 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 CDH8P55286 799 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 PSME3P61289 254 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 RNASE12Q5GAN4 147 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 PPCDCQ96CD2 204 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 PANX1Q96RD7 426 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 CCDC59Q9P031 241 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 CASKO14936 926 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 SNX4O95219 450 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 SLC35G4P0C7Q5 338 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 IFI35P80217 286 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 GCNT1Q02742 428 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 MBTD1Q05BQ5 628 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 CHST15Q7LFX5 561 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 CCDC54Q8NEL0 328 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 SLC9A6Q92581 669 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 PRMT6Q96LA8 375 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 ZYG11BQ9C0D3 744 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 PLGRKTQ9HBL7 147 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 SEMA3GQ9NS98 782 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 RSL24D1Q9UHA3 163 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 L1RE1Q9UN81 338 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 ACTL7BQ9Y614 415 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 A0A0A0MRY4 1105 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 CHST10O43529 356 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 KCNA5P22460 613 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 EIF4BP23588 611 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 FSCN1Q16658 493 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 NPNTQ6UXI9 565 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 OR2L5Q8NG80 312 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 SPATA13Q96N96 652 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 NDNQ99608 321 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 MRPL57Q9BQC6 102 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 CCNB1IP1Q9NPC3 277 aa12.36□□□□□ -0.43
CACNA1C-219ENST00000399649 SUV39H1O43463 412 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 ERAL1O75616 437 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 RAB10P61026 200 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 CBX2Q14781 532 aaPredicted RBP12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 CNSTQ6PJW8 725 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 SERPINA13PQ6UXR4 307 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 TRPV1Q8NER1 839 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 WNT8BQ93098 351 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 CORO1BQ9BR76 489 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 MTFR1LQ9H019 292 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 CHMP1AQ9HD42 196 aaPredicted RBP12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 OR12D3Q9UGF7 316 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 XKRYO14609 159 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 GATBO75879 557 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 TMPRSS11AQ6ZMR5 421 aa12.35□□□□□ -0.43
CACNA1C-219ENST00000399649 ETNPPLQ8TBG4 499 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms