RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 NACC1Q96RE7 527 aa6.3□□□□□ -1.4
TRAPPC13-202ENST00000399438 MXRA8Q9BRK3 442 aa6.3□□□□□ -1.4
TRAPPC13-202ENST00000399438 SEPSECSQ9HD40 501 aaKnown RBP6.3□□□□□ -1.4
TRAPPC13-202ENST00000399438 MYOZ2Q9NPC6 264 aa6.3□□□□□ -1.4
TRAPPC13-202ENST00000399438 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.3□□□□□ -1.4
TRAPPC13-202ENST00000399438 CORO1CQ9ULV4 474 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC13-202ENST00000399438 COMMD3-BMI1R4GMX3 469 aa6.3□□□□□ -1.4
TRAPPC13-202ENST00000399438 TARM1B6A8C7 271 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 E9PBE3 544 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 STX16-NPEPL1H3BU86 382 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 PJA2O43164 708 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 ATP8B1O43520 1251 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 DGAT1O75907 488 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 LCA5LO95447 670 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 GNA14O95837 355 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 UBTFL6P0CB48 400 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 CDK4P11802 303 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 PTPN3P26045 913 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 SLC7A1P30825 629 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 MDH1P40925 334 aaKnown RBP6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 CNTN2Q02246 1040 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 INPP5AQ14642 412 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 GPR68Q15743 365 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 UAP1Q16222 522 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 C3orf38Q5JPI3 329 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 TMEM63BQ5T3F8 832 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 SNRNP48Q6IEG0 339 aaKnown RBP6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 TMEM270Q6UE05 265 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 FAM83HQ6ZRV2 1179 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 COMTD1Q86VU5 262 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 MCEMP1Q8IX19 187 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 ULK2Q8IYT8 1036 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 BBS5Q8N3I7 341 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 OLIG1Q8TAK6 271 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 HAUS1Q96CS2 278 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 APOPT1Q96IL0 206 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 CEP170P1Q96L14 293 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 HNRNPABQ99729 332 aaKnown RBP6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 PINK1Q9BXM7 581 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 TAF1DQ9H5J8 278 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 C10orf88Q9H8K7 445 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 NECTIN3Q9NQS3 549 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 MOCS1Q9NZB8 636 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 LPAR3Q9UBY5 353 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 PGRMC1O00264 195 aaKnown RBP6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 NOP56O00567 594 aaKnown RBP6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 SHOXO15266 292 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 ZNF862O60290 1169 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 SCAF4O95104 1147 aaKnown RBP6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 CHRNA1P02708 482 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 PRKCBP05771 671 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 TUBBP07437 444 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 CNPP09543 421 aaKnown RBP6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 UBL4AP11441 157 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 HSD17B3P37058 310 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 VAMP7P51809 220 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 PMS2P54278 862 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 EPHB4P54760 987 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 PRRX1P54821 245 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 RWDD2BP57060 319 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 ERVFC1P60507 584 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 CSNK2BP67870 215 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 TUBB4BP68371 445 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 RPP38P78345 283 aaKnown RBP6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 DRP2Q13474 957 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 HIF1AQ16665 826 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 PLEKHS1Q5SXH7 462 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 C1orf220Q5T0J3 134 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 VASH1Q7L8A9 365 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 NT5DC3Q86UY8 548 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 IFT20Q8IY31 132 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 WNT8BQ93098 351 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 KREMEN1Q96MU8 473 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 TMEM117Q9H0C3 514 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 NKX2-4Q9H2Z4 354 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 IL21RQ9HBE5 538 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 FAM114A2Q9NRY5 505 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 RNF146Q9NTX7 359 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 OR6C2Q9NZP2 312 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 RABGEF1Q9UJ41 708 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 AGAP1Q9UPQ3 857 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 PITPNM2Q9BZ72 1349 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 SERTM2A0A1B0GWG4 89 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 PIK3R2O00459 728 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 NDUFAB1O14561 156 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 DHX15O43143 795 aaKnown RBP6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 CTAG2O75638 210 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 ONECUT2O95948 504 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 POTEJP0CG39 1038 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 COMTP21964 271 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 ARNTP27540 789 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 GABRB3P28472 473 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 GSCP56915 257 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 MYO1EQ12965 1108 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 TUBB2AQ13885 445 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 WIPI1Q5MNZ9 446 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 SCARA5Q6ZMJ2 495 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 RNF207Q6ZRF8 634 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 CATSPERGQ6ZRH7 1159 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms