RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 EDF1O60869 148 aaKnown RBP8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 SHBGP04278 402 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 PBX1P40424 430 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 SLC25A52Q3SY17 297 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 SMYD5Q6GMV2 418 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 FBXL19Q6PCT2 694 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 CYP2R1Q6VVX0 501 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 SVOPLQ8N434 492 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 OR4L1Q8NH43 312 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 PRCCQ92733 491 aaPredicted RBP8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 ZNF558Q96NG5 402 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 QKIQ96PU8 341 aaKnown RBP eCLIP8.4□□□□□ -1.061e-6■■■□□ 15.1
SPTLC3-201ENST00000399002 EIF2B3Q9NR50 452 aaKnown RBP8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 ARMCX1Q9P291 453 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 ZNF214Q9UL59 606 aaPredicted RBP8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 SNX7Q9UNH6 387 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 DHRS12A0PJE2 317 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 DDX3YO15523 660 aaKnown RBP8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 BPGMP07738 259 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 TCF4P15884 667 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 BDNFP23560 247 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 UGT1A5P35504 534 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 ASMTP46597 345 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 RFX3P48380 749 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 ROR2Q01974 943 aaKnown RBP8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 C9orf131Q5VYM1 1079 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 PRELID2Q8N945 189 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 SPATA20Q8TB22 786 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 HASPINQ8TF76 798 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 DNAJC1Q96KC8 554 aaKnown RBP8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 SEZ6LQ9BYH1 1024 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 ROGDIQ9GZN7 287 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 SEMA6AQ9H2E6 1030 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 C3orf14Q9HBI5 128 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 SAGE2PA6NJ88 616 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 TULP3O75386 442 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 RPP40O75818 363 aaKnown RBP8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 CST1P01037 141 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 CAPGP40121 348 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 GRIA3P42263 894 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 HADHBP55084 474 aaKnown RBP8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 SOX10P56693 466 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 CXCL9Q07325 125 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 PRKG2Q13237 762 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 NOMO1Q15155 1222 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 ZYG11AQ6WRX3 759 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 UNC5AQ6ZN44 842 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 TRABD2AQ86V40 505 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 OR4A15Q8NGL6 344 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 PYDC1Q8WXC3 89 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 HAS1Q92839 578 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 TBC1D10AQ9BXI6 508 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 RHOJQ9H4E5 214 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 ASB8Q9H765 288 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 PNPLA8Q9NP80 782 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 UBAP1Q9NZ09 502 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 POLR1DQ9Y2S0 133 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 SPEF2Q9C093 1822 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 SHPRHQ149N8 1683 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 G3V2T6 193 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 AVILO75366 819 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 SLC22A3O75751 556 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 LRIG2O94898 1065 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 FLT3P36888 993 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 FKBP1BP68106 108 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 POU5F1Q01860 360 aaKnown RBP8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 FOLH1Q04609 750 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 METTL21CQ5VZV1 264 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 LIN54Q6MZP7 749 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 ZCCHC23Q6ZST2 131 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 DENND6AQ8IWF6 608 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 AGAP11Q8TF27 550 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 RBM4BQ9BQ04 359 aaKnown RBP8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 RBM4Q9BWF3 364 aaKnown RBP8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 ST6GALNAC4Q9H4F1 302 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 PIF1Q9H611 641 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 COG5Q9UP83 839 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 AK5Q9Y6K8 562 aa8.4□□□□□ -1.07
SPTLC3-201ENST00000399002 SMIM35A0A1B0GVV1 85 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 SEC24AO95486 1093 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 BTG3Q14201 252 aaPredicted RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 SLC9A5Q14940 896 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 PRAMEF18Q5VWM3 479 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 NPNTQ6UXI9 565 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 HIPK1Q86Z02 1210 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 POU5F2Q8N7G0 328 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 CNTD1Q8N815 330 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 ZSCAN18Q8TBC5 510 aaPredicted RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 PNPT1Q8TCS8 783 aaKnown RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 MAGEE2Q8TD90 523 aaPredicted RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 RERGQ96A58 199 aaPredicted RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 ROPN1LQ96C74 230 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 DGCR14Q96DF8 476 aaKnown RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 FNDC11Q9BVV2 318 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 FHDC1Q9C0D6 1143 aaPredicted RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 FBXO6Q9NRD1 293 aaPredicted RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 PHF11Q9UIL8 331 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 NUDT5Q9UKK9 219 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 ENO2P09104 434 aaPredicted RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 CCNYL3P0C7X3 344 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms