RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 MCM8Q9UJA3 840 aa19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 SDR42E2A6NKP2 422 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 AP3B1O00203 1094 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 INSIG1O15503 277 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 SMAD6O43541 496 aaKnown RBP19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 HNRNPCL1O60812 293 aaKnown RBP19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 SERPINF2P08697 491 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 KRT4P19013 534 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 CES1P23141 567 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 MGAT1P26572 445 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 GDI1P31150 447 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 MSH2P43246 934 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 KCNJ2P63252 427 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 NSUN2Q08J23 767 aaKnown RBP eCLIP19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 CDH17Q12864 832 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 GEN1Q17RS7 908 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 GAB4Q2WGN9 574 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 MBLAC2Q68D91 279 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 CAPN12Q6ZSI9 719 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 TTC8Q8TAM2 541 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 NUDCD1Q96RS6 583 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 EBF2Q9HAK2 575 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 BFARQ9NZS9 450 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 SLC25A13Q9UJS0 675 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 MAD1L1Q9Y6D9 718 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 NUMBLQ9Y6R0 609 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 MYOFQ9NZM1 2061 aa19.49■□□□□ 0.71
PDLIM2-204ENST00000397760 POLR2EP19388 210 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 SLC6A11P48066 632 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 STK19P49842 368 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 RASSF2P50749 326 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 ECT2LQ008S8 904 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 SLC1A5Q15758 541 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 TMEM215Q68D42 235 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 RANBP10Q6VN20 620 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 FAM47EQ6ZV65 393 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 C4orf33Q8N1A6 199 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 DCAKDQ8WVC6 231 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 EBNA1BP2Q99848 306 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 LRMDAQ9H2I8 198 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 GTSE1Q9NYZ3 720 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 HS3ST2Q9Y278 367 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 SLC27A6Q9Y2P4 619 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 DOCK8Q8NF50 2099 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 IQANK1A0A1B0GTG1 560 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 SRCP12931 536 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 NPY2RP49146 381 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 CRADDP78560 199 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 SMAD4Q13485 552 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 DENND5AQ6IQ26 1287 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 CASC4Q6P4E1 433 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 LVRNQ6Q4G3 990 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 BANPQ8N9N5 519 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 WFIKKN2Q8TEU8 576 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 ZNF75CPQ92670 426 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 TTC17Q96AE7 1141 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 DEC1Q9P2X7 70 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 ZC3H7BQ9UGR2 993 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 GGT7Q9UJ14 662 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 C5orf42Q9H799 3197 aa19.48■□□□□ 0.71
PDLIM2-204ENST00000397760 A0A1W2PPM1 405 aa19.47■□□□□ 0.71
PDLIM2-204ENST00000397760 ANHXE9PGG2 379 aa19.47■□□□□ 0.71
PDLIM2-204ENST00000397760 MBTPS2O43462 519 aa19.47■□□□□ 0.71
PDLIM2-204ENST00000397760 TPH1P17752 444 aa19.47■□□□□ 0.71
PDLIM2-204ENST00000397760 SSTR1P30872 391 aa19.47■□□□□ 0.71
PDLIM2-204ENST00000397760 HTR4Q13639 388 aa19.47■□□□□ 0.71
PDLIM2-204ENST00000397760 SLC14A2Q15849 920 aa19.47■□□□□ 0.71
PDLIM2-204ENST00000397760 SEPT7Q16181 437 aaKnown RBP19.47■□□□□ 0.71
PDLIM2-204ENST00000397760 CERCAMQ5T4B2 595 aa19.47■□□□□ 0.71
PDLIM2-204ENST00000397760 ATXN7L2Q5T6C5 722 aaPredicted RBP19.47■□□□□ 0.71
PDLIM2-204ENST00000397760 GRAMD4Q6IC98 578 aa19.47■□□□□ 0.71
PDLIM2-204ENST00000397760 C10orf82Q8WW14 230 aa19.47■□□□□ 0.71
PDLIM2-204ENST00000397760 STAMBPL1Q96FJ0 436 aa19.47■□□□□ 0.71
PDLIM2-204ENST00000397760 CFAP36Q96G28 342 aa19.47■□□□□ 0.71
PDLIM2-204ENST00000397760 NSMCE3Q96MG7 304 aa19.47■□□□□ 0.71
PDLIM2-204ENST00000397760 TM6SF2Q9BZW4 377 aa19.47■□□□□ 0.71
PDLIM2-204ENST00000397760 SYBUQ9NX95 663 aa19.47■□□□□ 0.71
PDLIM2-204ENST00000397760 GRID1Q9ULK0 1009 aa19.47■□□□□ 0.71
PDLIM2-204ENST00000397760 RPL26L1Q9UNX3 145 aaKnown RBP19.47■□□□□ 0.71
PDLIM2-204ENST00000397760 XIRP2A4UGR9 3374 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 IL1BP01584 269 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 KRT16P08779 473 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 GSTA2P09210 222 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 FOSL2P15408 326 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 CHRNA4P43681 627 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 NCEH1Q6PIU2 408 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 SLC25A41Q8N5S1 370 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 IFT43Q96FT9 208 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 CIPCQ9C0C6 399 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 SAR1AQ9NR31 198 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 CHKBQ9Y259 395 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 LOC285095A0A1B0GVY8 99 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 TRAFD1O14545 582 aaPredicted RBP19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 ATP9BO43861 1147 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 ZNF821O75541 412 aaPredicted RBP19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 TROVE2P10155 538 aaKnown RBP eCLIP19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 GJA4P35212 333 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 CDK18Q07002 472 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 DGKKQ5KSL6 1271 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 GPR153Q6NV75 609 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms