RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 CHRNA4P43681 627 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 TNNT3P45378 269 aaPredicted RBP19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 GRIA4P48058 902 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 ITGA8P53708 1063 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 CNTN1Q12860 1018 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 TRADDQ15628 312 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 QPCTQ16769 361 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 UGP2Q16851 508 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 TTC31Q49AM3 519 aaPredicted RBP19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 SIRPB2Q5JXA9 342 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 PIP5KL1Q5T9C9 394 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 ANO7Q6IWH7 933 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 KIAA1324Q6UXG2 1013 aaKnown RBP19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 ZNF534Q76KX8 674 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 ERN2Q76MJ5 926 aaKnown RBP19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 HINFPQ9BQA5 517 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 ARNT2Q9HBZ2 717 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 EPB41L5Q9HCM4 733 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 CASS4Q9NQ75 786 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 PRMT8Q9NR22 394 aaPredicted RBP19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 A0A0J9YYE9 177 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 A0A1W2PP55 124 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 ANKRD66B4E2M5 251 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 PLK4O00444 970 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 TRBC1P01850 177 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 ADRB3P13945 408 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 P2RY2P41231 377 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 ABL2P42684 1182 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 NEK3P51956 506 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 POLR2LP62875 67 aaKnown RBP19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 CALCOCO2Q13137 446 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 AGBL4Q5VU57 503 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 PPP1R21Q6ZMI0 780 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 USP30Q70CQ3 517 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 HDDC3Q8N4P3 179 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 SLC25A41Q8N5S1 370 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 PAF1Q8N7H5 531 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 OR52K1Q8NGK4 314 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 RMDN1Q96DB5 314 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 MCCC1Q96RQ3 725 aaPredicted RBP19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 C11orf16Q9NQ32 467 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 GDF3Q9NR23 364 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 FAM114A2Q9NRY5 505 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 USP36Q9P275 1121 aaKnown RBP19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 BCCIPQ9P287 314 aaKnown RBP eCLIP19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 SERGEFQ9UGK8 458 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 EBF1Q9UH73 591 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 ANAPC5Q9UJX4 755 aa19.58■□□□□ 0.72
MAP1LC3A-203ENST00000397709 ACADMP11310 421 aa19.57■□□□□ 0.72
MAP1LC3A-203ENST00000397709 SUOXP51687 545 aa19.57■□□□□ 0.72
MAP1LC3A-203ENST00000397709 EPHB1P54762 984 aa19.57■□□□□ 0.72
MAP1LC3A-203ENST00000397709 SARNPP82979 210 aaKnown RBP19.57■□□□□ 0.72
MAP1LC3A-203ENST00000397709 CDH17Q12864 832 aa19.57■□□□□ 0.72
MAP1LC3A-203ENST00000397709 SFSWAPQ12872 951 aaKnown RBP19.57■□□□□ 0.72
MAP1LC3A-203ENST00000397709 LRRC8BQ6P9F7 803 aa19.57■□□□□ 0.72
MAP1LC3A-203ENST00000397709 ZDHHC24Q6UX98 284 aa19.57■□□□□ 0.72
MAP1LC3A-203ENST00000397709 CAND1Q86VP6 1230 aaKnown RBP19.57■□□□□ 0.72
MAP1LC3A-203ENST00000397709 PGBD3Q8N328 593 aa19.57■□□□□ 0.72
MAP1LC3A-203ENST00000397709 DTWD2Q8NBA8 298 aa19.57■□□□□ 0.72
MAP1LC3A-203ENST00000397709 ART4Q93070 314 aa19.57■□□□□ 0.72
MAP1LC3A-203ENST00000397709 RAB7BQ96AH8 199 aa19.57■□□□□ 0.72
MAP1LC3A-203ENST00000397709 SMIM14Q96QK8 99 aa19.57■□□□□ 0.72
MAP1LC3A-203ENST00000397709 ITM2CQ9NQX7 267 aa19.57■□□□□ 0.72
MAP1LC3A-203ENST00000397709 FBXL12Q9NXK8 326 aa19.57■□□□□ 0.72
MAP1LC3A-203ENST00000397709 FZD4Q9ULV1 537 aa19.57■□□□□ 0.72
MAP1LC3A-203ENST00000397709 AREL1O15033 823 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 SLC7A4O43246 635 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 SPINT1O43278 529 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 RNASEH2AO75792 299 aaKnown RBP19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 IGLV3-19P01714 112 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 PRKCGP05129 697 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 MLNP12872 115 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 TDGF1P13385 188 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 CTPS1P17812 591 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 HOXA6P31267 233 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 TPMTP51580 245 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 CAV1Q03135 178 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 CCDC15Q0P6D6 951 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 MSLNQ13421 630 aaPredicted RBP19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 LRRC73Q5JTD7 316 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 FBXL19Q6PCT2 694 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 TTC7BQ86TV6 843 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 KBTBD6Q86V97 674 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 NDUFAF2Q8N183 169 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 SCRN2Q96FV2 425 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 SERPINB12Q96P63 405 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 LYSMD1Q96S90 227 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 OMDQ99983 421 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 ANKZF1Q9H8Y5 726 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 XAB2Q9HCS7 855 aaKnown RBP19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 PCDH12Q9NPG4 1184 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 CD93Q9NPY3 652 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 ZDBF2Q9HCK1 2354 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 KMT2EQ8IZD2 1858 aa19.56■□□□□ 0.72
MAP1LC3A-203ENST00000397709 FAM86C2PA6NEL3 165 aa19.55■□□□□ 0.72
MAP1LC3A-203ENST00000397709 CAPN8A6NHC0 703 aa19.55■□□□□ 0.72
MAP1LC3A-203ENST00000397709 GOLGA8MH3BSY2 632 aa19.55■□□□□ 0.72
MAP1LC3A-203ENST00000397709 AP3B1O00203 1094 aa19.55■□□□□ 0.72
MAP1LC3A-203ENST00000397709 LAMTOR5O43504 91 aa19.55■□□□□ 0.72
MAP1LC3A-203ENST00000397709 ALPIP09923 528 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms