RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 RAVER1Q8IY67 606 aaKnown RBP19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 SLC25A41Q8N5S1 370 aa19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 OR2W6PQ8NHA6 318 aa19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 ZNF669Q96BR6 464 aaPredicted RBP19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 SUV39H2Q9H5I1 410 aa19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 CHRAC1Q9NRG0 131 aa19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 TREX1Q9NSU2 369 aa19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.15■□□□□ 0.661e-6■■■■□ 22.7
TSPAN4-204ENST00000397404 ZFATQ9P243 1243 aa19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 TXNDC16Q9P2K2 825 aa19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 DKK3Q9UBP4 350 aa19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 EVLQ9UI08 416 aaPredicted RBP19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 CHKBQ9Y259 395 aa19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 ZCWPW2A0A1B0GU75 182 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 C2CD4DB7Z1M9 353 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 KRT38O76015 456 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 PRLP01236 227 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 PRNPP04156 253 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 HADHAP40939 763 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 ACVR1Q04771 509 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 IHHQ14623 411 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 KBTBD12Q3ZCT8 623 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 TNFAIP8L3Q5GJ75 292 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 ATXN7L2Q5T6C5 722 aaPredicted RBP19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 TSTD2Q5T7W7 516 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 KIAA0408Q6ZU52 694 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 TRMT11Q7Z4G4 463 aaKnown RBP19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 GALNT7Q86SF2 657 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 RYBPQ8N488 228 aaPredicted RBP19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 ARFGAP2Q8N6H7 521 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 OR2A12Q8NGT7 310 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 SGSM3Q96HU1 749 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 PAFAH2Q99487 392 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 P2RY13Q9BPV8 354 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 FAM167BQ9BTA0 163 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 FBRSQ9HAH7 460 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 KCNK12Q9HB15 430 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 THAP10Q9P2Z0 257 aaPredicted RBP19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 SLCO3A1Q9UIG8 710 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 PCDHB9Q9Y5E1 797 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 PCDHGC4Q9Y5F7 938 aa19.14■□□□□ 0.65
TSPAN4-204ENST00000397404 SLC7A4O43246 635 aa19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 KRT37O76014 449 aa19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 TPH1P17752 444 aa19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 SLC6A11P48066 632 aa19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 PTPN5P54829 565 aa19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 CRADDP78560 199 aa19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 MTM1Q13496 603 aa19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 OLIG2Q13516 323 aa19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 ELAVL3Q14576 367 aaKnown RBP19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 FNDC3BQ53EP0 1204 aaKnown RBP19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 FAM182AQ5T1J6 154 aa19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 ZDHHC20Q5W0Z9 365 aa19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 DPY19L3Q6ZPD9 716 aa19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 USP45Q70EL2 814 aa19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 CNTN4Q8IWV2 1026 aa19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 DEFB123Q8N688 67 aa19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 TMIEQ8NEW7 156 aa19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 LPCAT1Q8NF37 534 aa19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 CPNE1Q99829 537 aa19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 EURLQ9NYK6 297 aa19.13■□□□□ 0.65
TSPAN4-204ENST00000397404 A0A0J9YYE9 177 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 TLDC2A0PJX2 215 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 TSPAN11A1L157 253 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 A6NNZ2 444 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 PRRT4C9JH25 899 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 RNF40O75150 1001 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 SIN3BO75182 1162 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 TRBC1P01850 177 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 DRD1P21728 446 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 CHRNA4P43681 627 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 QPCTQ16769 361 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 TUBB8Q3ZCM7 444 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 GDPD4Q6W3E5 623 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 CAPN12Q6ZSI9 719 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 KDELC2Q7Z4H8 507 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 GLT6D1Q7Z4J2 308 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 KCNMB4Q86W47 210 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 PAF1Q8N7H5 531 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 EPS8L3Q8TE67 593 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 OR8D1Q8WZ84 308 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 PPP1R16AQ96I34 528 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 TNKS2Q9H2K2 1166 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 TMEM245Q9H330 911 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 PLAC1Q9HBJ0 212 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 PPANQ9NQ55 473 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 PIH1D1Q9NWS0 290 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 IL36AQ9UHA7 158 aa19.12■□□□□ 0.65
TSPAN4-204ENST00000397404 COL4A3Q01955 1670 aa19.11■□□□□ 0.65
TSPAN4-204ENST00000397404 PFDN6O15212 129 aa19.11■□□□□ 0.65
TSPAN4-204ENST00000397404 LDB2O43679 373 aa19.11■□□□□ 0.65
TSPAN4-204ENST00000397404 FAM155BO75949 473 aa19.11■□□□□ 0.65
TSPAN4-204ENST00000397404 C1QAP02745 245 aa19.11■□□□□ 0.65
TSPAN4-204ENST00000397404 LPOP22079 712 aaPredicted RBP19.11■□□□□ 0.65
TSPAN4-204ENST00000397404 HMGCLP35914 325 aa19.11■□□□□ 0.65
TSPAN4-204ENST00000397404 POLD2P49005 469 aa19.11■□□□□ 0.65
TSPAN4-204ENST00000397404 CSE1LP55060 971 aaKnown RBP19.11■□□□□ 0.65
TSPAN4-204ENST00000397404 KDSRQ06136 332 aa19.11■□□□□ 0.65
TSPAN4-204ENST00000397404 CCDC15Q0P6D6 951 aa19.11■□□□□ 0.65
TSPAN4-204ENST00000397404 ENPP2Q13822 863 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms