RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 APOBEC2Q9Y235 224 aaKnown RBP14.69□□□□□ -0.06
SEC13-208ENST00000397109 ITM2BQ9Y287 266 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 CA5BQ9Y2D0 317 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 A0A1W2PQ67 120 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 FPGTO14772 594 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 SPINT1O43278 529 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 BUB1BO60566 1050 aaPredicted RBP14.69□□□□□ -0.06
SEC13-208ENST00000397109 TM7SF2O76062 418 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 EPHA8P29322 1005 aaPredicted RBP14.69□□□□□ -0.06
SEC13-208ENST00000397109 RGRP47804 291 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 SCNN1BP51168 640 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 CLDN2P57739 230 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 POLR2LP62875 67 aaKnown RBP14.69□□□□□ -0.06
SEC13-208ENST00000397109 IL9RQ01113 521 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 SLC10A7Q0GE19 358 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 FOXC1Q12948 553 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 SHBQ15464 509 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 UGP2Q16851 508 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 TMEM52BQ4KMG9 183 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 RALGPS1Q5JS13 557 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 MARC1Q5VT66 337 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 LRRC38Q5VT99 294 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 ERAP2Q6P179 960 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 KYAT3Q6YP21 454 aaKnown RBP14.69□□□□□ -0.06
SEC13-208ENST00000397109 GCNT7Q6ZNI0 430 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 VSIG1Q86XK7 387 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 CPNE8Q86YQ8 564 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 CAMK1DQ8IU85 385 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 PAF1Q8N7H5 531 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 OR13H1Q8NG92 308 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 PCDH19Q8TAB3 1148 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 BAHD1Q8TBE0 780 aaPredicted RBP14.69□□□□□ -0.06
SEC13-208ENST00000397109 SAP25Q8TEE9 199 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 UBXN4Q92575 508 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 FAF2Q96CS3 445 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 IFT43Q96FT9 208 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 BMFQ96LC9 184 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 TRIM10Q9UDY6 481 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 GGT7Q9UJ14 662 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 SAR1BQ9Y6B6 198 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 ACACBO00763 2458 aa14.68□□□□□ -0.06
SEC13-208ENST00000397109 ZNF487B1APH4 448 aa14.68□□□□□ -0.06
SEC13-208ENST00000397109 TNFSF14O43557 240 aa14.68□□□□□ -0.06
SEC13-208ENST00000397109 PEX11BO96011 259 aa14.68□□□□□ -0.06
SEC13-208ENST00000397109 TUBBP07437 444 aa14.68□□□□□ -0.06
SEC13-208ENST00000397109 MX2P20592 715 aa14.68□□□□□ -0.06
SEC13-208ENST00000397109 KDELR1P24390 212 aa14.68□□□□□ -0.06
SEC13-208ENST00000397109 NOP2P46087 812 aaKnown RBP14.68□□□□□ -0.06
SEC13-208ENST00000397109 RABIFP47224 123 aa14.68□□□□□ -0.06
SEC13-208ENST00000397109 GALNT2Q10471 571 aa14.68□□□□□ -0.06
SEC13-208ENST00000397109 NCBP2-AS2Q69YL0 99 aa14.68□□□□□ -0.06
SEC13-208ENST00000397109 TIGD7Q6NT04 549 aaPredicted RBP14.68□□□□□ -0.06
SEC13-208ENST00000397109 Q6ZSR6 202 aa14.68□□□□□ -0.06
SEC13-208ENST00000397109 PTAR1Q7Z6K3 402 aaPredicted RBP14.68□□□□□ -0.06
SEC13-208ENST00000397109 LRRC57Q8N9N7 239 aa14.68□□□□□ -0.06
SEC13-208ENST00000397109 ECHDC3Q96DC8 303 aa14.68□□□□□ -0.06
SEC13-208ENST00000397109 NUDCD1Q96RS6 583 aa14.68□□□□□ -0.06
SEC13-208ENST00000397109 PCDH12Q9NPG4 1184 aa14.68□□□□□ -0.06
SEC13-208ENST00000397109 HAUS2Q9NVX0 235 aa14.68□□□□□ -0.06
SEC13-208ENST00000397109 RNF14Q9UBS8 474 aa14.68□□□□□ -0.06
SEC13-208ENST00000397109 BTBD3Q9Y2F9 522 aa14.68□□□□□ -0.06
SEC13-208ENST00000397109 SHROOM3Q8TF72 1996 aa14.68□□□□□ -0.06
SEC13-208ENST00000397109 ARID1BQ8NFD5 2236 aaPredicted RBP14.67□□□□□ -0.06
SEC13-208ENST00000397109 POM121BA6NF01 834 aa14.67□□□□□ -0.06
SEC13-208ENST00000397109 TOR1BO14657 336 aa14.67□□□□□ -0.06
SEC13-208ENST00000397109 MUSKO15146 869 aa14.67□□□□□ -0.06
SEC13-208ENST00000397109 RAD51BO15315 384 aa14.67□□□□□ -0.06
SEC13-208ENST00000397109 MMP20O60882 483 aa14.67□□□□□ -0.06
SEC13-208ENST00000397109 SOCS5O75159 536 aa14.67□□□□□ -0.06
SEC13-208ENST00000397109 FTH1P19P0C7X4 201 aa14.67□□□□□ -0.06
SEC13-208ENST00000397109 GARSP41250 739 aaKnown RBP14.67□□□□□ -0.06
SEC13-208ENST00000397109 MMP13P45452 471 aa14.67□□□□□ -0.06
SEC13-208ENST00000397109 ODF2Q5BJF6 829 aa14.67□□□□□ -0.06
SEC13-208ENST00000397109 LRRC73Q5JTD7 316 aa14.67□□□□□ -0.06
SEC13-208ENST00000397109 GATAD2AQ86YP4 633 aa14.67□□□□□ -0.06
SEC13-208ENST00000397109 RAPGEF5Q92565 580 aa14.67□□□□□ -0.06
SEC13-208ENST00000397109 FATE1Q969F0 183 aa14.67□□□□□ -0.06
SEC13-208ENST00000397109 TSGA13Q96PP4 275 aa14.67□□□□□ -0.06
SEC13-208ENST00000397109 RNF157Q96PX1 679 aa14.67□□□□□ -0.06
SEC13-208ENST00000397109 KLF6Q99612 283 aaPredicted RBP14.67□□□□□ -0.06
SEC13-208ENST00000397109 MGME1Q9BQP7 344 aa14.67□□□□□ -0.06
SEC13-208ENST00000397109 SCUBE2Q9NQ36 999 aa14.67□□□□□ -0.06
SEC13-208ENST00000397109 DDX56Q9NY93 547 aaKnown RBP14.67□□□□□ -0.06
SEC13-208ENST00000397109 ATP8A1Q9Y2Q0 1164 aa14.67□□□□□ -0.06
SEC13-208ENST00000397109 ANKRD36A6QL64 1941 aa14.67□□□□□ -0.06
SEC13-208ENST00000397109 MACROD2A1Z1Q3 448 aa14.66□□□□□ -0.06
SEC13-208ENST00000397109 LRRD1A4D1F6 860 aa14.66□□□□□ -0.06
SEC13-208ENST00000397109 CFAP69A5D8W1 941 aa14.66□□□□□ -0.06
SEC13-208ENST00000397109 MFSD11O43934 449 aa14.66□□□□□ -0.06
SEC13-208ENST00000397109 TCP1P17987 556 aaKnown RBP14.66□□□□□ -0.06
SEC13-208ENST00000397109 ITIH2P19823 946 aa14.66□□□□□ -0.06
SEC13-208ENST00000397109 CR2P20023 1033 aa14.66□□□□□ -0.06
SEC13-208ENST00000397109 CCNCP24863 283 aa14.66□□□□□ -0.06
SEC13-208ENST00000397109 NFKBIAP25963 317 aa14.66□□□□□ -0.06
SEC13-208ENST00000397109 CKAP4Q07065 602 aaKnown RBP14.66□□□□□ -0.06
SEC13-208ENST00000397109 BNIP3Q12983 259 aa14.66□□□□□ -0.06
SEC13-208ENST00000397109 RHOT1Q8IXI2 618 aa14.66□□□□□ -0.06
SEC13-208ENST00000397109 TEX26Q8N6G2 289 aa14.66□□□□□ -0.06
SEC13-208ENST00000397109 ADAMTS14Q8WXS8 1223 aa14.66□□□□□ -0.06
SEC13-208ENST00000397109 SPOCK2Q92563 424 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms