RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 SRGAP2O75044 1071 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 TCP1P17987 556 aaKnown RBP13.86□□□□□ -0.19
SEC13-205ENST00000397101 KDELR1P24390 212 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 STK19P49842 368 aaPredicted RBP13.86□□□□□ -0.19
SEC13-205ENST00000397101 METAP1P53582 386 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 HNRNPKP61978 463 aaKnown RBP eCLIP13.86□□□□□ -0.19
SEC13-205ENST00000397101 PDK2Q15119 407 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 CA9Q16790 459 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 CCDC181Q5TID7 509 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 KAZNQ674X7 775 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 RAP1GAP2Q684P5 730 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 LRRC31Q6UY01 552 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 ABI3BPQ7Z7G0 1075 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 CHSY1Q86X52 802 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 RFX6Q8HWS3 928 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 PSTKQ8IV42 348 aaKnown RBP13.86□□□□□ -0.19
SEC13-205ENST00000397101 PYROXD2Q8N2H3 581 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 EXD1Q8NHP7 514 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.86□□□□□ -0.19
SEC13-205ENST00000397101 HAPLN3Q96S86 360 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 KCTD15Q96SI1 283 aaPredicted RBP13.86□□□□□ -0.19
SEC13-205ENST00000397101 OSBPL9Q96SU4 736 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 EPAS1Q99814 870 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 GPR27Q9NS67 375 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 SNX12Q9UMY4 172 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 SNX10Q9Y5X0 201 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 TCAF2A6NFQ2 919 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 H3BRJ5 948 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 K7ESM1 405 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 EEF2KO00418 725 aaKnown RBP13.85□□□□□ -0.19
SEC13-205ENST00000397101 FFAR2O15552 330 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 TCEA3O75764 348 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 PYGMP11217 842 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 VAV1P15498 845 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 TACR2P21452 398 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 HNRNPA2B1P22626 353 aaKnown RBP13.85□□□□□ -0.19
SEC13-205ENST00000397101 AKT2P31751 481 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 GGCXP38435 758 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 PEX5P50542 639 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 TAS2R38P59533 333 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 TPI1P60174 286 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 SRSF1Q07955 248 aaKnown RBP eCLIP13.85□□□□□ -0.19
SEC13-205ENST00000397101 EIF4EBP2Q13542 120 aaPredicted RBP13.85□□□□□ -0.19
SEC13-205ENST00000397101 LLGL1Q15334 1064 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 PAPD7Q5XG87 772 aaKnown RBP13.85□□□□□ -0.19
SEC13-205ENST00000397101 RWDD4Q6NW29 188 aaKnown RBP13.85□□□□□ -0.19
SEC13-205ENST00000397101 ZCCHC8Q6NZY4 707 aaKnown RBP13.85□□□□□ -0.19
SEC13-205ENST00000397101 CLEC14AQ86T13 490 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 LGI2Q8N0V4 545 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 WDR48Q8TAF3 677 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 IFI44Q8TCB0 444 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 MAPK15Q8TD08 544 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 RAPGEF5Q92565 580 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 ALG3Q92685 438 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 PRR11Q96HE9 360 aaPredicted RBP13.85□□□□□ -0.19
SEC13-205ENST00000397101 CAPZA3Q96KX2 299 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 MAGEB5Q9BZ81 275 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 OSBPL2Q9H1P3 480 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 OR12D3Q9UGF7 316 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 IL17BQ9UHF5 180 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 XPO7Q9UIA9 1087 aaKnown RBP13.85□□□□□ -0.19
SEC13-205ENST00000397101 SATB2Q9UPW6 733 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 HS3ST4Q9Y661 456 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 HS3ST3A1Q9Y663 406 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 CSNK1G3Q9Y6M4 447 aa13.85□□□□□ -0.19
SEC13-205ENST00000397101 EME2A4GXA9 379 aaPredicted RBP13.84□□□□□ -0.19
SEC13-205ENST00000397101 F5H5T6 163 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 L1CAMP32004 1257 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 PAFAH1B1P43034 410 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 ZNF284Q2VY69 593 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 ACBD5Q5T8D3 534 aaPredicted RBP13.84□□□□□ -0.19
SEC13-205ENST00000397101 PIP5KL1Q5T9C9 394 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 CXorf57Q6NSI4 855 aaKnown RBP13.84□□□□□ -0.19
SEC13-205ENST00000397101 MFSD7Q6UXD7 560 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 SPOCD1Q6ZMY3 1216 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 CCDC81Q6ZN84 652 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 CYP4V2Q6ZWL3 525 aaPredicted RBP13.84□□□□□ -0.19
SEC13-205ENST00000397101 HORMAD1Q86X24 394 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 SLC22A18ASQ8N1D0 253 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 ARL14Q8N4G2 192 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 OR13H1Q8NG92 308 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 ALG14Q96F25 216 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 PRMT1Q99873 361 aaKnown RBP13.84□□□□□ -0.19
SEC13-205ENST00000397101 HEMGNQ9BXL5 484 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 CARD9Q9H257 536 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 PCDH18Q9HCL0 1135 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 ANLNQ9NQW6 1124 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 SLC25A13Q9UJS0 675 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 CA5BQ9Y2D0 317 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 ENTPD2Q9Y5L3 495 aa13.84□□□□□ -0.19
SEC13-205ENST00000397101 A0A1W2PNU3 283 aaPredicted RBP13.83□□□□□ -0.2
SEC13-205ENST00000397101 A0A1W2PQU0 124 aa13.83□□□□□ -0.2
SEC13-205ENST00000397101 SLC31A1O15431 190 aa13.83□□□□□ -0.2
SEC13-205ENST00000397101 CD48P09326 243 aa13.83□□□□□ -0.2
SEC13-205ENST00000397101 PRLRP16471 622 aa13.83□□□□□ -0.2
SEC13-205ENST00000397101 TGM2P21980 687 aa13.83□□□□□ -0.2
SEC13-205ENST00000397101 COPS2P61201 443 aa13.83□□□□□ -0.2
SEC13-205ENST00000397101 MMRN1Q13201 1228 aa13.83□□□□□ -0.2
SEC13-205ENST00000397101 AUHQ13825 339 aaKnown RBP13.83□□□□□ -0.2
SEC13-205ENST00000397101 DPYSL3Q14195 570 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms