RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 NCAPGQ9BPX3 1015 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 SUV39H2Q9H5I1 410 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 SIRPGQ9P1W8 387 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 DAAM1Q9Y4D1 1078 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 FHOD1Q9Y613 1164 aa17.66■□□□□ 0.42
EXOSC3-202ENST00000396521 TLN1Q9Y490 2541 aaKnown RBP17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 A0A1W2PQM1 296 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 F8VZ95 297 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 FAM72CH0Y354 149 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 TNFRSF10CO14798 259 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 CYP1A1P04798 512 aaPredicted RBP17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 MMEP08473 750 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 ERCC5P28715 1186 aaPredicted RBP17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 EPHB2P29323 1055 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 HTR7P34969 479 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 MIIPQ5JXC2 388 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 MANEAQ5SRI9 462 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 CERCAMQ5T4B2 595 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 FAM72AQ5TYM5 149 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 FAM72DQ6L9T8 149 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 RD3Q7Z3Z2 195 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 SLFN11Q7Z7L1 901 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 FAM72BQ86X60 149 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 FOXP3Q9BZS1 431 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 CATSPERBQ9H7T0 1116 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 WDR70Q9NW82 654 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 PISDQ9UG56 409 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 DACH1Q9UI36 760 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 RABGEF1Q9UJ41 708 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 NEU3Q9UQ49 428 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 LOXL2Q9Y4K0 774 aa17.65■□□□□ 0.42
EXOSC3-202ENST00000396521 WASH4PA8MWX3 477 aa17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 CACNB4O00305 520 aaPredicted RBP17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 PDE2AO00408 941 aaPredicted RBP17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 NUDT21O43809 227 aaKnown RBP17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 GADD45BO75293 160 aaPredicted RBP17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 CELA2BP08218 269 aaPredicted RBP17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 KRT3P12035 628 aa17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 HDAC4P56524 1084 aa17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 GSCP56915 257 aaPredicted RBP17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 CDR2Q01850 454 aa17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 SERINC3Q13530 473 aa17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 ARHGEF7Q14155 803 aa17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 TSR1Q2NL82 804 aaKnown RBP17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 C15orf59Q2T9L4 293 aaPredicted RBP17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 LINC00303Q3SY05 128 aa17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 EFHC2Q5JST6 749 aa17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 LRRC73Q5JTD7 316 aa17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 UMODL1-AS1Q8N2C9 162 aa17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 FAM172AQ8WUF8 416 aa17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 PCDH12Q9NPG4 1184 aa17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 COL27A1Q8IZC6 1860 aaPredicted RBP17.64■□□□□ 0.41
EXOSC3-202ENST00000396521 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.63■□□□□ 0.41
EXOSC3-202ENST00000396521 PES1O00541 588 aaKnown RBP17.63■□□□□ 0.41
EXOSC3-202ENST00000396521 FGF10O15520 208 aaPredicted RBP17.63■□□□□ 0.41
EXOSC3-202ENST00000396521 DESP17661 470 aa17.63■□□□□ 0.41
EXOSC3-202ENST00000396521 CSNK1DP48730 415 aa17.63■□□□□ 0.41
EXOSC3-202ENST00000396521 LIG3P49916 1009 aa17.63■□□□□ 0.41
EXOSC3-202ENST00000396521 KIAA1024LP59773 190 aa17.63■□□□□ 0.41
EXOSC3-202ENST00000396521 POLR2LP62875 67 aaKnown RBP17.63■□□□□ 0.41
EXOSC3-202ENST00000396521 C1QBPQ07021 282 aaKnown RBP17.63■□□□□ 0.41
EXOSC3-202ENST00000396521 CT47A1Q5JQC4 288 aaPredicted RBP17.63■□□□□ 0.41
EXOSC3-202ENST00000396521 LEKR1Q6ZMV7 388 aa17.63■□□□□ 0.41
EXOSC3-202ENST00000396521 TAF8Q7Z7C8 310 aa17.63■□□□□ 0.41
EXOSC3-202ENST00000396521 FAM46DQ8NEK8 389 aa17.63■□□□□ 0.41
EXOSC3-202ENST00000396521 OR56A4Q8NGH8 313 aa17.63■□□□□ 0.41
EXOSC3-202ENST00000396521 GPT2Q8TD30 523 aa17.63■□□□□ 0.41
EXOSC3-202ENST00000396521 KCTD5Q9NXV2 234 aa17.63■□□□□ 0.41
EXOSC3-202ENST00000396521 NOCTQ9UK39 431 aaKnown RBP17.63■□□□□ 0.41
EXOSC3-202ENST00000396521 ATP8A1Q9Y2Q0 1164 aa17.63■□□□□ 0.41
EXOSC3-202ENST00000396521 BOD1L1Q8NFC6 3051 aa17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 ANKRD62A6NC57 917 aa17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 RASA4BC9J798 803 aa17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 TERTO14746 1132 aaKnown RBP17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 RASA4O43374 803 aa17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 SUV39H1O43463 412 aa17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 EEF1GP26641 437 aaKnown RBP17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 MMP12P39900 470 aa17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 UBE2HP62256 183 aa17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 PEX6Q13608 980 aa17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 TGIF1Q15583 401 aa17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 CAMK4Q16566 473 aa17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 C14orf28Q4W4Y0 310 aa17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 SPRED1Q7Z699 444 aa17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 DTX1Q86Y01 620 aa17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 CCDC185Q8N715 623 aa17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 KIAA1524Q8TCG1 905 aa17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 EXTL1Q92935 676 aa17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 NOL6Q9H6R4 1146 aaKnown RBP17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 LRIT1Q9P2V4 623 aa17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 UBA2Q9UBT2 640 aaPredicted RBP17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 OR1A2Q9Y585 309 aa17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 PCDHGA4Q9Y5G9 962 aa17.62■□□□□ 0.41
EXOSC3-202ENST00000396521 EIF3CLB5ME19 914 aaKnown RBP17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 PPFIA2O75334 1257 aa17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 CALB1P05937 261 aa17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 ITGB6P18564 788 aa17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 ITIH2P19823 946 aa17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 GPD1P21695 349 aa17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 SERPINA4P29622 427 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms