RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.63□□□□□ -0.551e-6■■□□□ 11.4
PDXDC1-202ENST00000396410 C2orf81A6NN90 581 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 MATN2O00339 956 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 IPO13O94829 963 aaKnown RBP11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 PRDX6P30041 224 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 ACVRL1P37023 503 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 GATMP50440 423 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 PKNOX1P55347 436 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 YBEYP58557 167 aaPredicted RBP11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 MTA1Q13330 715 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 VEPH1Q14D04 833 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 ARHGEF6Q15052 776 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 GPR158Q5T848 1215 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 CLEC14AQ86T13 490 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 ICA1LQ8NDH6 482 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 ISL2Q96A47 359 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 TTPALQ9BTX7 342 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 GPR62Q9BZJ7 368 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 YIPF3Q9GZM5 350 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 TRPM5Q9NZQ8 1165 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 SEPT3Q9UH03 358 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 E5RI56 91 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 CD3EAPO15446 510 aaKnown RBP11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 GSRP00390 522 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 FGF1P05230 155 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 HLA-DPA1P20036 260 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 ITGAXP20702 1163 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 MAGEA11P43364 429 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 MAGEA12P43365 314 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 TWF1Q12792 350 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 STX5Q13190 355 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 NOGQ13253 232 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 TMEM198Q66K66 360 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 LAYNQ6UX15 382 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 MAVSQ7Z434 540 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 LPCAT1Q8NF37 534 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 S100A14Q9HCY8 104 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 GEMIN8Q9NWZ8 242 aaKnown RBP11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 TMEM233B4DJY2 109 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 SLC7A4O43246 635 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 SNX2O60749 519 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 PQBP1O60828 265 aaKnown RBP11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 ALDH1A3P47895 512 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 TM4SF4P48230 202 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 CCNG1P51959 295 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 AAGABQ6PD74 315 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 PRSS55Q6UWB4 352 aaPredicted RBP11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 GLT6D1Q7Z4J2 308 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 DEFB128Q7Z7B8 93 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 MAPK15Q8TD08 544 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 PKMYT1Q99640 499 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 Q9H521 79 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 MRGBPQ9NV56 204 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 TSR3Q9UJK0 312 aaKnown RBP11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 TMEM88BA6NKF7 163 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 GABRB3P28472 473 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 HOXC13P31276 330 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 AGKQ53H12 422 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 ZRANB3Q5FWF4 1079 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 PPM1LQ5SGD2 360 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 IRGCQ6NXR0 463 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 MSANTD2Q6P1R3 559 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 CD300LGQ6UXG3 332 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 RNF19BQ6ZMZ0 732 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 C16orf59Q7L2K0 433 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 DHDDSQ86SQ9 333 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 CUZD1Q86UP6 607 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 CENPLQ8N0S6 344 aaPredicted RBP11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 ACTRT2Q8TDY3 377 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 MIEF2Q96C03 454 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 WDR41Q9HAD4 459 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 SRRDQ9UH36 339 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 RNF112Q9ULX5 631 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 KCTD3Q9Y597 815 aa11.62□□□□□ -0.55
PDXDC1-202ENST00000396410 A0A088AWK7 358 aa11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 MTMR11A4FU01 709 aa11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 NPHS1O60500 1241 aa11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 MAPKAPK2P49137 400 aa11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 TUFMP49411 452 aaKnown RBP11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 KCNQ1P51787 676 aa11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 MSLNQ13421 630 aaPredicted RBP11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 MED21Q13503 144 aa11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 ACBD5Q5T8D3 534 aaPredicted RBP11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 RTN4RL1Q86UN2 441 aaPredicted RBP11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 MAB21L3Q8N8X9 362 aa11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 OR7D4Q8NG98 312 aa11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 GDPD5Q8WTR4 605 aa11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 BHMTQ93088 406 aa11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 DNAJC1Q96KC8 554 aaKnown RBP11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 DDX50Q9BQ39 737 aaKnown RBP11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 CCDC28BQ9BUN5 200 aa11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 KLHL4Q9C0H6 718 aa11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 MRPL40Q9NQ50 206 aaKnown RBP11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 CCDC167Q9P0B6 97 aa11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 ARL5AQ9Y689 179 aa11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 A0A1W2PQ45 241 aaPredicted RBP11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 A0A1W2PQY0 241 aa11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 MAGEA13PA6NCF6 341 aa11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 H0Y626 953 aa11.61□□□□□ -0.55
PDXDC1-202ENST00000396410 ZBTB14O43829 449 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms