RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 MAP1BP46821 2468 aaKnown RBP13.84□□□□□ -0.19
CXCL12-205ENST00000395794 KMT2BQ9UMN6 2715 aaPredicted RBP13.84□□□□□ -0.19
CXCL12-205ENST00000395794 CFAP69A5D8W1 941 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 K7ESM1 405 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 AQP9O43315 295 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 PROSCO94903 275 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 KRT7P08729 469 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 CKMT1AP12532 417 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 IGFALSP35858 605 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 MMP12P39900 470 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 PEX5P50542 639 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 BLKP51451 505 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 PPARDQ03181 441 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 IRF4Q15306 451 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 HES3Q5TGS1 186 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 TXNRD3NBQ6F5E7 133 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 ZCCHC8Q6NZY4 707 aaKnown RBP13.84□□□□□ -0.19
CXCL12-205ENST00000395794 MACC1Q6ZN28 852 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 PROSER1Q86XN7 944 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 MARCH9Q86YJ5 346 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 TP53I13Q8NBR0 393 aaPredicted RBP13.84□□□□□ -0.19
CXCL12-205ENST00000395794 RNF214Q8ND24 703 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 PDCD6IPQ8WUM4 868 aaKnown RBP13.84□□□□□ -0.19
CXCL12-205ENST00000395794 GLMNQ92990 594 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 APOLD1Q96LR9 279 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 CCDC42Q96M95 316 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 DNAJC7Q99615 494 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 ABCG4Q9H172 646 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 MBNL1Q9NR56 388 aaKnown RBP13.84□□□□□ -0.19
CXCL12-205ENST00000395794 ETNK2Q9NVF9 386 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 APOBEC3BQ9UH17 382 aaKnown RBP13.84□□□□□ -0.19
CXCL12-205ENST00000395794 COQ6Q9Y2Z9 468 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 AKAP13Q12802 2813 aa13.84□□□□□ -0.19
CXCL12-205ENST00000395794 SSU72P8A0A1W2PR75 194 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 MAFKO60675 156 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 SOCS5O75159 536 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 NEBLO76041 1014 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 PRKCGP05129 697 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 ELFN1P0C7U0 828 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 MMP13P45452 471 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 RPIAP49247 311 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 TARDBPQ13148 414 aaKnown RBP eCLIP13.83□□□□□ -0.2
CXCL12-205ENST00000395794 INPP5AQ14642 412 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 PDK2Q15119 407 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 PRRT3Q5FWE3 981 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 RALGPS1Q5JS13 557 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 VSTM4Q8IW00 320 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 TP53INP2Q8IXH6 220 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 PHACTR4Q8IZ21 702 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 FAM181AQ8N9Y4 354 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 MDM1Q8TC05 714 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 SCG3Q8WXD2 468 aaKnown RBP13.83□□□□□ -0.2
CXCL12-205ENST00000395794 ECHDC3Q96DC8 303 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 NXPE2Q96DL1 559 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 NUDCD1Q96RS6 583 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 DOLKQ9UPQ8 538 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 CLCA2Q9UQC9 943 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 CABIN1Q9Y6J0 2220 aa13.83□□□□□ -0.2
CXCL12-205ENST00000395794 TP53BP1Q12888 1972 aaPredicted RBP13.82□□□□□ -0.2
CXCL12-205ENST00000395794 TPP1O14773 563 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 MUSKO15146 869 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 PCCBP05166 539 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 GP1BAP07359 652 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 ANXA6P08133 673 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 TMEM253P0C7T8 217 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 KRT10P13645 584 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 CTSEP14091 401 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 SEMG2Q02383 582 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 CYP4F3Q08477 520 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 ITKQ08881 620 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 EIF2B5Q13144 721 aaKnown RBP13.82□□□□□ -0.2
CXCL12-205ENST00000395794 MMRN1Q13201 1228 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 AGERQ15109 404 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 WSCD2Q2TBF2 565 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 ODF2Q5BJF6 829 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 TIGD7Q6NT04 549 aaPredicted RBP13.82□□□□□ -0.2
CXCL12-205ENST00000395794 KDM7AQ6ZMT4 941 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 ZSWIM9Q86XI8 627 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 NDUFAF2Q8N183 169 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 FSTL5Q8N475 847 aaPredicted RBP13.82□□□□□ -0.2
CXCL12-205ENST00000395794 TBATAQ96M53 351 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 ZNF670Q9BS34 389 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 ABHD10Q9NUJ1 306 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 DKK4Q9UBT3 224 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 KLF15Q9UIH9 416 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 SALL4Q9UJQ4 1053 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 NENFQ9UMX5 172 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 PCDHGC4Q9Y5F7 938 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 AK5Q9Y6K8 562 aa13.82□□□□□ -0.2
CXCL12-205ENST00000395794 TRPM6Q9BX84 2022 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 USP24Q9UPU5 2620 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 A8MX80 341 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 CACNB4O00305 520 aaPredicted RBP13.81□□□□□ -0.2
CXCL12-205ENST00000395794 MFAP3LO75121 409 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 RECQL5O94762 991 aaPredicted RBP13.81□□□□□ -0.2
CXCL12-205ENST00000395794 RASGRP1O95267 797 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 CPP00450 1065 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 CAPNS1P04632 268 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 CD48P09326 243 aa13.81□□□□□ -0.2
CXCL12-205ENST00000395794 GIMD1P0DJR0 217 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms