RNA–Protein interactions for RNA: ENST00000395736.7

TOM1-202, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-202ENST00000395736 LSM14AQ8ND56 463 aaKnown RBP11.11□□□□□ -0.63
TOM1-202ENST00000395736 CXorf40AQ8TE69 158 aa11.11□□□□□ -0.63
TOM1-202ENST00000395736 CPLX3Q8WVH0 158 aa11.11□□□□□ -0.63
TOM1-202ENST00000395736 ECHDC3Q96DC8 303 aa11.11□□□□□ -0.63
TOM1-202ENST00000395736 APOLD1Q96LR9 279 aa11.11□□□□□ -0.63
TOM1-202ENST00000395736 DCBLD2Q96PD2 775 aa11.11□□□□□ -0.63
TOM1-202ENST00000395736 CSPG4P5Q96PW8 444 aa11.11□□□□□ -0.63
TOM1-202ENST00000395736 NCAPGQ9BPX3 1015 aa11.11□□□□□ -0.63
TOM1-202ENST00000395736 SUV39H2Q9H5I1 410 aa11.11□□□□□ -0.63
TOM1-202ENST00000395736 MRPL47Q9HD33 250 aaKnown RBP11.11□□□□□ -0.63
TOM1-202ENST00000395736 PCDH12Q9NPG4 1184 aa11.11□□□□□ -0.63
TOM1-202ENST00000395736 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.11□□□□□ -0.63
TOM1-202ENST00000395736 NLGN3Q9NZ94 848 aa11.11□□□□□ -0.63
TOM1-202ENST00000395736 IFNKQ9P0W0 207 aa11.11□□□□□ -0.63
TOM1-202ENST00000395736 FLNCQ14315 2725 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 TTC24A2A3L6 582 aaPredicted RBP11.1□□□□□ -0.63
TOM1-202ENST00000395736 TRAFD1O14545 582 aaPredicted RBP11.1□□□□□ -0.63
TOM1-202ENST00000395736 RIOK3O14730 519 aaKnown RBP11.1□□□□□ -0.63
TOM1-202ENST00000395736 DAPK3O43293 454 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 PALMO75781 387 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 CYP1A2P05177 515 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 CELA2BP08218 269 aaPredicted RBP11.1□□□□□ -0.63
TOM1-202ENST00000395736 RARAP10276 462 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 CDK4P11802 303 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 CKMT1AP12532 417 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 C6P13671 934 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 GM2AP17900 193 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 AMPD1P23109 780 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 CSNK1DP48730 415 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 HNRNPKP61978 463 aaKnown RBP eCLIP11.1□□□□□ -0.63
TOM1-202ENST00000395736 IL10RBQ08334 325 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 SLC10A7Q0GE19 358 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 WSCD2Q2TBF2 565 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 KCTD16Q68DU8 428 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 SRLQ86TD4 932 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 PGBD5Q8N414 524 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 PDCD7Q8N8D1 485 aaKnown RBP11.1□□□□□ -0.63
TOM1-202ENST00000395736 FAM181AQ8N9Y4 354 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 HCAR2Q8TDS4 363 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 HSPH1Q92598 858 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 ZNF641Q96N77 438 aaPredicted RBP11.1□□□□□ -0.63
TOM1-202ENST00000395736 TUBGCP5Q96RT8 1024 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.1□□□□□ -0.63
TOM1-202ENST00000395736 LRRC61Q9BV99 259 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 NUP85Q9BW27 656 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 XPO4Q9C0E2 1151 aaKnown RBP11.1□□□□□ -0.63
TOM1-202ENST00000395736 ZWILCHQ9H900 591 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 SP110Q9HB58 689 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 PCDH18Q9HCL0 1135 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 DONSONQ9NYP3 566 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 IPO11Q9UI26 975 aaKnown RBP11.1□□□□□ -0.63
TOM1-202ENST00000395736 ANAPC7Q9UJX3 599 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 ATP8A1Q9Y2Q0 1164 aa11.1□□□□□ -0.63
TOM1-202ENST00000395736 H3BRJ5 948 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 CASC3O15234 703 aaKnown RBP11.09□□□□□ -0.63
TOM1-202ENST00000395736 AQP9O43315 295 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 MAFKO60675 156 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 GCATO75600 419 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 CD48P09326 243 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 JUPP14923 745 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 JUNDP17535 347 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 CR2P20023 1033 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 IL4RP24394 825 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 CASP14P31944 242 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 HNF1BP35680 557 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 LIG3P49916 1009 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 SUOXP51687 545 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 ZNF135P52742 658 aaPredicted RBP11.09□□□□□ -0.63
TOM1-202ENST00000395736 YPEL5P62699 121 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 TPM4P67936 248 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 DAB2P98082 770 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 KCNC4Q03721 635 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 ELP6Q0PNE2 266 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 LBRQ14739 615 aaKnown RBP11.09□□□□□ -0.63
TOM1-202ENST00000395736 GRM3Q14832 879 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 AGERQ15109 404 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 DEFB133Q30KQ1 61 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 BRAT1Q6PJG6 821 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 MACC1Q6ZN28 852 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 DCBLD1Q8N8Z6 715 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 TEKT4Q8WW24 435 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 FUBP1Q96AE4 644 aaKnown RBP11.09□□□□□ -0.63
TOM1-202ENST00000395736 PSKH2Q96QS6 385 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 CINPQ9BW66 212 aaPredicted RBP11.09□□□□□ -0.63
TOM1-202ENST00000395736 CLPBQ9H078 707 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 ATP13A3Q9H7F0 1226 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 APOBEC3BQ9UH17 382 aaKnown RBP11.09□□□□□ -0.63
TOM1-202ENST00000395736 BZW2Q9Y6E2 419 aaKnown RBP11.09□□□□□ -0.63
TOM1-202ENST00000395736 UTP20O75691 2785 aaKnown RBP11.09□□□□□ -0.63
TOM1-202ENST00000395736 DOPEY2Q9Y3R5 2298 aa11.09□□□□□ -0.63
TOM1-202ENST00000395736 GOLGA6L19H0YKK7 550 aa11.08□□□□□ -0.64
TOM1-202ENST00000395736 H3BM21 787 aa11.08□□□□□ -0.64
TOM1-202ENST00000395736 TLX3O43711 291 aaPredicted RBP11.08□□□□□ -0.64
TOM1-202ENST00000395736 ALPPL2P10696 532 aa11.08□□□□□ -0.64
TOM1-202ENST00000395736 SERPINA4P29622 427 aa11.08□□□□□ -0.64
TOM1-202ENST00000395736 HNRNPH3P31942 346 aaKnown RBP11.08□□□□□ -0.64
TOM1-202ENST00000395736 EIF4A3P38919 411 aaKnown RBP11.08□□□□□ -0.64
TOM1-202ENST00000395736 ARSEP51690 589 aa11.08□□□□□ -0.64
TOM1-202ENST00000395736 THOP1P52888 689 aa11.08□□□□□ -0.64
TOM1-202ENST00000395736 NSUN2Q08J23 767 aaKnown RBP eCLIP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms