RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ARRDC2Q8TBH0 407 aa15.24■□□□□ 0.03
SCAF11-204ENST00000395454 WFDC5Q8TCV5 224 aa15.24■□□□□ 0.03
SCAF11-204ENST00000395454 ZNF75CPQ92670 426 aaPredicted RBP15.24■□□□□ 0.03
SCAF11-204ENST00000395454 RANBP9Q96S59 729 aa15.24■□□□□ 0.03
SCAF11-204ENST00000395454 RBBP8Q99708 897 aa15.24■□□□□ 0.03
SCAF11-204ENST00000395454 CHRAC1Q9NRG0 131 aa15.24■□□□□ 0.03
SCAF11-204ENST00000395454 HEBP1Q9NRV9 189 aa15.24■□□□□ 0.03
SCAF11-204ENST00000395454 SLC17A6Q9P2U8 582 aa15.24■□□□□ 0.03
SCAF11-204ENST00000395454 SORCS3Q9UPU3 1222 aa15.24■□□□□ 0.03
SCAF11-204ENST00000395454 SOX9P48436 509 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 CSRP3P50461 194 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 LIMK2P53671 638 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 PFKPQ01813 784 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 MSLNQ13421 630 aaPredicted RBP15.23■□□□□ 0.03
SCAF11-204ENST00000395454 LACTB2Q53H82 288 aaPredicted RBP15.23■□□□□ 0.03
SCAF11-204ENST00000395454 FSCBQ5H9T9 825 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 TMCO4Q5TGY1 634 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 PDPK2PQ6A1A2 396 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 CES3Q6UWW8 571 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 C12orf40Q86WS4 652 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 GJD3Q8N144 294 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 SPOCK2Q92563 424 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 NECAB3Q96P71 396 aaPredicted RBP15.23■□□□□ 0.03
SCAF11-204ENST00000395454 FAM111AQ96PZ2 611 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 PAIP2Q9BPZ3 127 aaKnown RBP15.23■□□□□ 0.03
SCAF11-204ENST00000395454 FICDQ9BVA6 458 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 PITPNM3Q9BZ71 974 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 TREX1Q9NSU2 369 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 NSMCE4AQ9NXX6 385 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 DUSP12Q9UNI6 340 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 TCAF1Q9Y4C2 921 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 ATP9BO43861 1147 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 SERPINB4P48594 390 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 WNT3AP56704 352 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 ZKSCAN8Q15776 578 aaPredicted RBP15.23■□□□□ 0.03
SCAF11-204ENST00000395454 SEPT7Q16181 437 aaKnown RBP15.23■□□□□ 0.03
SCAF11-204ENST00000395454 TJAP1Q5JTD0 557 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 KCNMB4Q86W47 210 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 PGBD5Q8N414 524 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 DNASE1L2Q92874 299 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 KDM4CQ9H3R0 1056 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 TRPV5Q9NQA5 729 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 TBC1D30Q9Y2I9 924 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 ARL2BPQ9Y2Y0 163 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 NCOR1O75376 2440 aa15.23■□□□□ 0.03
SCAF11-204ENST00000395454 COL4A3Q01955 1670 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 CCT8L1PA6NM43 557 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 TRIM24O15164 1050 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 TULP3O75386 442 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 KIAA0754O94854 1291 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 RHOCP08134 193 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 TPH1P17752 444 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 NMBRP28336 390 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 HLA-FP30511 346 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 ARCN1P48444 511 aaKnown RBP15.22■□□□□ 0.03
SCAF11-204ENST00000395454 GNA12Q03113 381 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 IHHQ14623 411 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 INSCQ1MX18 579 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 GAB4Q2WGN9 574 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 RNF43Q68DV7 783 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 CXorf57Q6NSI4 855 aaKnown RBP15.22■□□□□ 0.03
SCAF11-204ENST00000395454 KYAT3Q6YP21 454 aaKnown RBP15.22■□□□□ 0.03
SCAF11-204ENST00000395454 SETD3Q86TU7 594 aaPredicted RBP15.22■□□□□ 0.03
SCAF11-204ENST00000395454 FIBINQ8TAL6 211 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 RAB3IL1Q8TBN0 382 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 NSMCE1Q8WV22 266 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 FSD1LQ9BXM9 530 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 MUC3BQ9H195 1237 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 NT5MQ9NPB1 228 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 SLC2A4RGQ9NR83 387 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 SIRPGQ9P1W8 387 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 PHTF1Q9UMS5 762 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 PIAS3Q9Y6X2 628 aa15.22■□□□□ 0.03
SCAF11-204ENST00000395454 LOC285095A0A1B0GVY8 99 aa15.21■□□□□ 0.03
SCAF11-204ENST00000395454 ILVBLA1L0T0 632 aa15.21■□□□□ 0.03
SCAF11-204ENST00000395454 BIRC5O15392 142 aa15.21■□□□□ 0.03
SCAF11-204ENST00000395454 SPRP35270 261 aaPredicted RBP15.21■□□□□ 0.03
SCAF11-204ENST00000395454 ACVRL1P37023 503 aa15.21■□□□□ 0.03
SCAF11-204ENST00000395454 HADHAP40939 763 aa15.21■□□□□ 0.03
SCAF11-204ENST00000395454 SLC6A11P48066 632 aa15.21■□□□□ 0.03
SCAF11-204ENST00000395454 DGKGP49619 791 aa15.21■□□□□ 0.03
SCAF11-204ENST00000395454 LBRQ14739 615 aaKnown RBP15.21■□□□□ 0.03
SCAF11-204ENST00000395454 IER5LQ5T953 404 aa15.21■□□□□ 0.03
SCAF11-204ENST00000395454 NAIF1Q69YI7 327 aaPredicted RBP15.21■□□□□ 0.03
SCAF11-204ENST00000395454 KIAA0930Q6ICG6 404 aaPredicted RBP15.21■□□□□ 0.03
SCAF11-204ENST00000395454 ZNF783Q6ZMS7 281 aa15.21■□□□□ 0.03
SCAF11-204ENST00000395454 ZNF354CQ86Y25 554 aa15.21■□□□□ 0.03
SCAF11-204ENST00000395454 ETFBKMTQ8IXQ9 262 aa15.21■□□□□ 0.03
SCAF11-204ENST00000395454 NDUFAF2Q8N183 169 aa15.21■□□□□ 0.03
SCAF11-204ENST00000395454 PPHLN1Q8NEY8 458 aaKnown RBP15.21■□□□□ 0.03
SCAF11-204ENST00000395454 OR52K2Q8NGK3 314 aa15.21■□□□□ 0.03
SCAF11-204ENST00000395454 PTPRN2Q92932 1015 aa15.21■□□□□ 0.03
SCAF11-204ENST00000395454 CHFRQ96EP1 664 aa15.21■□□□□ 0.03
SCAF11-204ENST00000395454 ZNF778Q96MU6 729 aa15.21■□□□□ 0.03
SCAF11-204ENST00000395454 IQCGQ9H095 443 aaKnown RBP15.21■□□□□ 0.03
SCAF11-204ENST00000395454 C12orf65Q9H3J6 166 aaKnown RBP15.21■□□□□ 0.03
SCAF11-204ENST00000395454 SLCO1B3Q9NPD5 702 aa15.21■□□□□ 0.03
SCAF11-204ENST00000395454 CD320Q9NPF0 282 aa15.21■□□□□ 0.03
SCAF11-204ENST00000395454 ABCB8Q9NUT2 735 aa15.21■□□□□ 0.03
SCAF11-204ENST00000395454 TXNDC16Q9P2K2 825 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms