RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 TMEM63AO94886 807 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 EPN2O95208 641 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 AP2A1O95782 977 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 ZNF806P0C7X5 589 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 MLNP12872 115 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 HLA-EP13747 358 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 GNSP15586 552 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 PRKCHP24723 683 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 MMP13P45452 471 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 RECQLP46063 649 aaPredicted RBP8.56□□□□□ -1.04
HERC4-203ENST00000395185 VPS41P49754 854 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 GEMIN4P57678 1058 aaKnown RBP8.56□□□□□ -1.04
HERC4-203ENST00000395185 PTPRNQ16849 979 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 HNRNPA1L2Q32P51 320 aaKnown RBP8.56□□□□□ -1.04
HERC4-203ENST00000395185 RALGPS1Q5JS13 557 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 WDR45BQ5MNZ6 344 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 FAM46CQ5VWP2 391 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 PMS2CLQ68D20 193 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 ZNF776Q68DI1 518 aaPredicted RBP8.56□□□□□ -1.04
HERC4-203ENST00000395185 IL31Q6EBC2 164 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 ITPRIPL1Q6GPH6 555 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 DENND5AQ6IQ26 1287 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 FBXO38Q6PIJ6 1188 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 ARHGEF18Q6ZSZ5 1173 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 CYP2U1Q7Z449 544 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 CAND1Q86VP6 1230 aaKnown RBP8.56□□□□□ -1.04
HERC4-203ENST00000395185 TMEFF1Q8IYR6 380 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 ATP11CQ8NB49 1132 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 CEP76Q8TAP6 659 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 IFT81Q8WYA0 676 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 PIGKQ92643 395 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 ERLEC1Q96DZ1 483 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 MYO19Q96H55 970 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 AGAP3Q96P47 875 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 PPP1R2P1Q96PQ5 205 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 TRIM31Q9BZY9 425 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 TSPYL1Q9H0U9 437 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 EPB41L4BQ9H329 900 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 SP110Q9HB58 689 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 PRSS16Q9NQE7 514 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 SEMA4GQ9NTN9 838 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 KLHL8Q9P2G9 620 aaPredicted RBP8.56□□□□□ -1.04
HERC4-203ENST00000395185 LHX3Q9UBR4 397 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 UBA2Q9UBT2 640 aaPredicted RBP8.56□□□□□ -1.04
HERC4-203ENST00000395185 CYP8B1Q9UNU6 501 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 ACTL7AQ9Y615 435 aa8.56□□□□□ -1.04
HERC4-203ENST00000395185 MYOFQ9NZM1 2061 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 HELZP42694 1942 aaKnown RBP8.55□□□□□ -1.04
HERC4-203ENST00000395185 K7ERQ8 282 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 CBX4O00257 560 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 EIF3HO15372 352 aaKnown RBP eCLIP8.55□□□□□ -1.04
HERC4-203ENST00000395185 SMAD6O43541 496 aaKnown RBP8.55□□□□□ -1.04
HERC4-203ENST00000395185 ANXA9O76027 345 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 TMCC1O94876 653 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 PRLP01236 227 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 NFKB1P19838 968 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 PSMB4P28070 264 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 HOXD12P35452 270 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 ACTN2P35609 894 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 MPLP40238 635 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 CTSOP43234 321 aaPredicted RBP8.55□□□□□ -1.04
HERC4-203ENST00000395185 RGRP47804 291 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 SERPINH1P50454 418 aaKnown RBP8.55□□□□□ -1.04
HERC4-203ENST00000395185 TPMTP51580 245 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 SKOR1P84550 965 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 CALCOCO2Q13137 446 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 AASDHQ4L235 1098 aaPredicted RBP8.55□□□□□ -1.04
HERC4-203ENST00000395185 MSS51Q4VC12 460 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 SWT1Q5T5J6 900 aaKnown RBP8.55□□□□□ -1.04
HERC4-203ENST00000395185 ARMC3Q5W041 872 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 LYSMD4Q5XG99 296 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 SYT12Q8IV01 421 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 RGL4Q8IZJ4 473 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 AGGF1Q8N302 714 aaeCLIP8.55□□□□□ -1.04
HERC4-203ENST00000395185 TSEN2Q8NCE0 465 aaKnown RBP8.55□□□□□ -1.04
HERC4-203ENST00000395185 CADM4Q8NFZ8 388 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 FRS2Q8WU20 508 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 TOE1Q96GM8 510 aaKnown RBP8.55□□□□□ -1.04
HERC4-203ENST00000395185 RPL10LQ96L21 214 aaKnown RBP8.55□□□□□ -1.04
HERC4-203ENST00000395185 MRGPRX2Q96LB1 330 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 SIGLEC10Q96LC7 697 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 NUDCD1Q96RS6 583 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 FMO2Q99518 471 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 OMDQ99983 421 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 WDR83Q9BRX9 315 aaKnown RBP8.55□□□□□ -1.04
HERC4-203ENST00000395185 NUSAP1Q9BXS6 441 aaKnown RBP8.55□□□□□ -1.04
HERC4-203ENST00000395185 FUT8Q9BYC5 575 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 CEP41Q9BYV8 373 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 CEP44Q9C0F1 390 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 MKRN2Q9H000 416 aaKnown RBP8.55□□□□□ -1.04
HERC4-203ENST00000395185 BTBD1Q9H0C5 482 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 PCED1AQ9H1Q7 454 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 CASS4Q9NQ75 786 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 SLCO3A1Q9UIG8 710 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 AAR2Q9Y312 384 aaKnown RBP8.55□□□□□ -1.04
HERC4-203ENST00000395185 KIF26AQ9ULI4 1882 aaPredicted RBP8.55□□□□□ -1.04
HERC4-203ENST00000395185 ZNF318Q5VUA4 2279 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 WDFY4Q6ZS81 3184 aa8.55□□□□□ -1.04
HERC4-203ENST00000395185 MUC6Q6W4X9 2439 aa8.54□□□□□ -1.04
HERC4-203ENST00000395185 COL4A3Q01955 1670 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms