RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 C18orf8Q96DM3 657 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 WDR92Q96MX6 357 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 GDAP1L1Q96MZ0 367 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 CMKLR1Q99788 373 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 ADNPQ9H2P0 1102 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 TMEM248Q9NWD8 314 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 DKK3Q9UBP4 350 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 HOOK1Q9UJC3 728 aaKnown RBP15.97■□□□□ 0.15
SNCA-205ENST00000394991 PCDHB11Q9Y5F2 797 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 UTP20O75691 2785 aaKnown RBP15.97■□□□□ 0.15
SNCA-205ENST00000394991 CLEC18AA5D8T8 446 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 GP1BBP13224 206 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 CCL4P13236 92 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 RHOQP17081 205 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 CD82P27701 267 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 HTR1BP28222 390 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 NRG1Q02297 640 aaPredicted RBP15.96■□□□□ 0.15
SNCA-205ENST00000394991 HLTFQ14527 1009 aaKnown RBP eCLIP15.96■□□□□ 0.15
SNCA-205ENST00000394991 EXOC3L4Q17RC7 722 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 C14orf28Q4W4Y0 310 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 RWDD4Q6NW29 188 aaKnown RBP15.96■□□□□ 0.15
SNCA-205ENST00000394991 CLEC18BQ6UXF7 455 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 CLEC18CQ8NCF0 446 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 TMEM35BQ8NCS4 154 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 PMEPA1Q969W9 287 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 TTYH3Q9C0H2 523 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 KLC2Q9H0B6 622 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 MAGEH1Q9H213 219 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 FGF22Q9HCT0 170 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 TMEM51Q9NW97 253 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 SEPT3Q9UH03 358 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 DNAJC12Q9UKB3 198 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 DGKBQ9Y6T7 804 aa15.96■□□□□ 0.15
SNCA-205ENST00000394991 ICE1Q9Y2F5 2266 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 GOLGA6L4A6NEF3 574 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 B4DGG1 531 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 KDELR3O43731 214 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 RAMP2O60895 175 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 PIGNO95427 931 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 IGSF6O95976 241 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 TNFP01375 233 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 PCCBP05166 539 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 PNLIPP16233 465 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 CR2P20023 1033 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 FOXK1P85037 733 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 ATP11AP98196 1134 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 B4GALNT1Q00973 533 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 IGFBP7Q16270 282 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 ELOA2Q8IYF1 753 aaPredicted RBP15.95■□□□□ 0.14
SNCA-205ENST00000394991 FAM71AQ8IYT1 594 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 EMC1Q8N766 993 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 PLA2G15Q8NCC3 412 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 FAM46DQ8NEK8 389 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 NOL6Q9H6R4 1146 aaKnown RBP15.95■□□□□ 0.14
SNCA-205ENST00000394991 MRPL40Q9NQ50 206 aaKnown RBP15.95■□□□□ 0.14
SNCA-205ENST00000394991 LRIT1Q9P2V4 623 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 OR12D3Q9UGF7 316 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 HPCAL4Q9UM19 191 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 MFHAS1Q9Y4C4 1052 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 NOTCH2Q04721 2471 aa15.95■□□□□ 0.14
SNCA-205ENST00000394991 NBPF19A0A087WUL8 3843 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 GTPBP10A4D1E9 387 aaKnown RBP15.94■□□□□ 0.14
SNCA-205ENST00000394991 TMEM202A6NGA9 273 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 BUB1O43683 1085 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 LRIG2O94898 1065 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 ADRA1BP35368 520 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 POLE2P56282 527 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 RHOAP61586 193 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 RAD51Q06609 339 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 ELP6Q0PNE2 266 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 KCNAB2Q13303 367 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 MTM1Q13496 603 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 AGERQ15109 404 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 C15orf59Q2T9L4 293 aaPredicted RBP15.94■□□□□ 0.14
SNCA-205ENST00000394991 MAP9Q49MG5 647 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 EFHC2Q5JST6 749 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 SPECC1LQ69YQ0 1117 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 BORAQ6PGQ7 559 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 TAF8Q7Z7C8 310 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 IRF2BP1Q8IU81 584 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 CCL4L1Q8NHW4 92 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 NKD1Q969G9 470 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 FUBP1Q96AE4 644 aaKnown RBP15.94■□□□□ 0.14
SNCA-205ENST00000394991 EXOC2Q96KP1 924 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 B3GNT4Q9C0J1 378 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 RDH14Q9HBH5 336 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 PCDH12Q9NPG4 1184 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 METTL5Q9NRN9 209 aaKnown RBP15.94■□□□□ 0.14
SNCA-205ENST00000394991 LHX3Q9UBR4 397 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 MYO9AB2RTY4 2548 aa15.94■□□□□ 0.14
SNCA-205ENST00000394991 TSPAN11A1L157 253 aa15.93■□□□□ 0.14
SNCA-205ENST00000394991 STMND1H3BQB6 276 aa15.93■□□□□ 0.14
SNCA-205ENST00000394991 B4GAT1O43505 415 aa15.93■□□□□ 0.14
SNCA-205ENST00000394991 XPAP23025 273 aaPredicted RBP15.93■□□□□ 0.14
SNCA-205ENST00000394991 ARHGEF7Q14155 803 aa15.93■□□□□ 0.14
SNCA-205ENST00000394991 CDO1Q16878 200 aa15.93■□□□□ 0.14
SNCA-205ENST00000394991 TAF3Q5VWG9 929 aa15.93■□□□□ 0.14
SNCA-205ENST00000394991 SMYD5Q6GMV2 418 aa15.93■□□□□ 0.14
SNCA-205ENST00000394991 DPY19L2P1Q6NXN4 242 aa15.93■□□□□ 0.14
SNCA-205ENST00000394991 ZSWIM9Q86XI8 627 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms