RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 CCKBRP32239 447 aa21.31■■□□□ 1
TRAF4-203ENST00000394925 PTPN9P43378 593 aa21.31■■□□□ 1
TRAF4-203ENST00000394925 HDAC4P56524 1084 aa21.31■■□□□ 1
TRAF4-203ENST00000394925 INO80DQ53TQ3 878 aaPredicted RBP21.31■■□□□ 1
TRAF4-203ENST00000394925 PYROXD2Q8N2H3 581 aa21.31■■□□□ 1
TRAF4-203ENST00000394925 OR6C4Q8NGE1 309 aa21.31■■□□□ 1
TRAF4-203ENST00000394925 FAM172AQ8WUF8 416 aa21.31■■□□□ 1
TRAF4-203ENST00000394925 CENPIQ92674 756 aaPredicted RBP21.31■■□□□ 1
TRAF4-203ENST00000394925 EXTL1Q92935 676 aa21.31■■□□□ 1
TRAF4-203ENST00000394925 HMCESQ96FZ2 354 aa21.31■■□□□ 1
TRAF4-203ENST00000394925 ARHGAP9Q9BRR9 750 aa21.31■■□□□ 1
TRAF4-203ENST00000394925 TRIM4Q9C037 500 aa21.31■■□□□ 1
TRAF4-203ENST00000394925 PCDH12Q9NPG4 1184 aa21.31■■□□□ 1
TRAF4-203ENST00000394925 NOCTQ9UK39 431 aaKnown RBP21.31■■□□□ 1
TRAF4-203ENST00000394925 ACSL6Q9UKU0 697 aa21.31■■□□□ 1
TRAF4-203ENST00000394925 LOXL2Q9Y4K0 774 aa21.31■■□□□ 1
TRAF4-203ENST00000394925 ANKRD36A6QL64 1941 aa21.3■■□□□ 1
TRAF4-203ENST00000394925 GFPT2O94808 682 aa21.3■■□□□ 1
TRAF4-203ENST00000394925 TNFP01375 233 aa21.3■■□□□ 1
TRAF4-203ENST00000394925 CYP1A1P04798 512 aaPredicted RBP21.3■■□□□ 1
TRAF4-203ENST00000394925 PCCBP05166 539 aa21.3■■□□□ 1
TRAF4-203ENST00000394925 EPHB2P29323 1055 aa21.3■■□□□ 1
TRAF4-203ENST00000394925 SUOXP51687 545 aa21.3■■□□□ 1
TRAF4-203ENST00000394925 KCTD16Q68DU8 428 aa21.3■■□□□ 1
TRAF4-203ENST00000394925 ZNF677Q86XU0 584 aa21.3■■□□□ 1
TRAF4-203ENST00000394925 CCNJLQ8IV13 435 aa21.3■■□□□ 1
TRAF4-203ENST00000394925 RTL3Q8N8U3 475 aaKnown RBP21.3■■□□□ 1
TRAF4-203ENST00000394925 LHX3Q9UBR4 397 aa21.3■■□□□ 1
TRAF4-203ENST00000394925 DAAM1Q9Y4D1 1078 aa21.3■■□□□ 1
TRAF4-203ENST00000394925 RASA4BC9J798 803 aa21.29■■□□□ 1
TRAF4-203ENST00000394925 NVLO15381 856 aaKnown RBP21.29■■□□□ 1
TRAF4-203ENST00000394925 RASA4O43374 803 aa21.29■■□□□ 1
TRAF4-203ENST00000394925 LIPCP11150 499 aa21.29■■□□□ 1
TRAF4-203ENST00000394925 ITIH1P19827 911 aa21.29■■□□□ 1
TRAF4-203ENST00000394925 LIG3P49916 1009 aa21.29■■□□□ 1
TRAF4-203ENST00000394925 FMO1Q01740 532 aa21.29■■□□□ 1
TRAF4-203ENST00000394925 CDR2Q01850 454 aa21.29■■□□□ 1
TRAF4-203ENST00000394925 CYTH1Q15438 398 aa21.29■■□□□ 1
TRAF4-203ENST00000394925 UGP2Q16851 508 aa21.29■■□□□ 1
TRAF4-203ENST00000394925 SLFN11Q7Z7L1 901 aa21.29■■□□□ 1
TRAF4-203ENST00000394925 GPR156Q8NFN8 814 aa21.29■■□□□ 1
TRAF4-203ENST00000394925 ATL2Q8NHH9 583 aa21.29■■□□□ 1
TRAF4-203ENST00000394925 NTAN1Q96AB6 310 aa21.29■■□□□ 1
TRAF4-203ENST00000394925 PDXPQ96GD0 296 aa21.29■■□□□ 1
TRAF4-203ENST00000394925 WDR92Q96MX6 357 aa21.29■■□□□ 1
TRAF4-203ENST00000394925 SUV39H2Q9H5I1 410 aa21.29■■□□□ 1
TRAF4-203ENST00000394925 PRKCGP05129 697 aa21.28■■□□□ 1
TRAF4-203ENST00000394925 KRT3P12035 628 aa21.28■■□□□ 1
TRAF4-203ENST00000394925 CHRNB2P17787 502 aa21.28■■□□□ 1
TRAF4-203ENST00000394925 RFC1P35251 1148 aaPredicted RBP21.28■■□□□ 1
TRAF4-203ENST00000394925 CSRP3P50461 194 aa21.28■■□□□ 1
TRAF4-203ENST00000394925 NFKB2Q00653 900 aa21.28■■□□□ 1
TRAF4-203ENST00000394925 SERINC3Q13530 473 aa21.28■■□□□ 1
TRAF4-203ENST00000394925 ERAP2Q6P179 960 aa21.28■■□□□ 1
TRAF4-203ENST00000394925 HCAR2Q8TDS4 363 aa21.28■■□□□ 1
TRAF4-203ENST00000394925 RBM15Q96T37 977 aaKnown RBP eCLIP21.28■■□□□ 14e-6■■■□□ 19
TRAF4-203ENST00000394925 SEPT10Q9P0V9 454 aa21.28■■□□□ 1
TRAF4-203ENST00000394925 IL17BQ9UHF5 180 aa21.28■■□□□ 1
TRAF4-203ENST00000394925 PTPN13Q12923 2485 aa21.27■■□□□ 1
TRAF4-203ENST00000394925 PRAMEF33A0A0G2JMD5 474 aa21.27■■□□□ 1
TRAF4-203ENST00000394925 PRAMEF10O60809 474 aa21.27■■□□□ 1
TRAF4-203ENST00000394925 GLB1P16278 677 aa21.27■■□□□ 1
TRAF4-203ENST00000394925 ETV5P41161 510 aa21.27■■□□□ 1
TRAF4-203ENST00000394925 YBEYP58557 167 aaPredicted RBP21.27■■□□□ 1
TRAF4-203ENST00000394925 MANEAQ5SRI9 462 aa21.27■■□□□ 1
TRAF4-203ENST00000394925 CFAP58Q5T655 872 aa21.27■■□□□ 1
TRAF4-203ENST00000394925 SCYL2Q6P3W7 929 aa21.27■■□□□ 1
TRAF4-203ENST00000394925 XKR5Q6UX68 686 aa21.27■■□□□ 1
TRAF4-203ENST00000394925 TAF8Q7Z7C8 310 aa21.27■■□□□ 1
TRAF4-203ENST00000394925 VASH2Q86V25 355 aa21.27■■□□□ 1
TRAF4-203ENST00000394925 ZFAND4Q86XD8 727 aa21.27■■□□□ 1
TRAF4-203ENST00000394925 DNAAF5Q86Y56 855 aa21.27■■□□□ 1
TRAF4-203ENST00000394925 SFTPA2Q8IWL1 248 aa21.27■■□□□ 1
TRAF4-203ENST00000394925 PLA2G15Q8NCC3 412 aa21.27■■□□□ 1
TRAF4-203ENST00000394925 FAM46DQ8NEK8 389 aa21.27■■□□□ 1
TRAF4-203ENST00000394925 UBA2Q9UBT2 640 aaPredicted RBP21.27■■□□□ 1
TRAF4-203ENST00000394925 APPL1Q9UKG1 709 aa21.27■■□□□ 1
TRAF4-203ENST00000394925 DGKBQ9Y6T7 804 aa21.27■■□□□ 1
TRAF4-203ENST00000394925 UBR5O95071 2799 aaPredicted RBP21.27■■□□□ 1
TRAF4-203ENST00000394925 ARHGEF17Q96PE2 2063 aaPredicted RBP21.27■□□□□ 0.99
TRAF4-203ENST00000394925 COL12A1Q99715 3063 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 TSPAN11A1L157 253 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 CREB3O43889 395 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 ITGB2P05107 769 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 FAM87AP0C7U9 286 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 GPD1P21695 349 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 MMP12P39900 470 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 MAPK10P53779 464 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 UBE2HP62256 183 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 ZFP36L1Q07352 338 aaKnown RBP21.26■□□□□ 0.99
TRAF4-203ENST00000394925 PTP4A2Q12974 167 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 MTM1Q13496 603 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 GRM3Q14832 879 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 AGERQ15109 404 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 DPCR1Q3MIW9 517 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 PARP15Q460N3 678 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 EFHC2Q5JST6 749 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 CERCAMQ5T4B2 595 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 WDR59Q6PJI9 974 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 OR1E3Q8WZA6 343 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms