RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 CARNMT1Q8N4J0 409 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 ANKRD42Q8N9B4 389 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 SHKBP1Q8TBC3 707 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 MGARPQ8TDB4 240 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 DCAKDQ8WVC6 231 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 TMA16Q96EY4 203 aaKnown RBP7.02□□□□□ -1.29
RTN4-205ENST00000394609 FCRL3Q96P31 734 aaPredicted RBP7.02□□□□□ -1.29
RTN4-205ENST00000394609 TGS1Q96RS0 853 aaKnown RBP7.02□□□□□ -1.29
RTN4-205ENST00000394609 DDX50Q9BQ39 737 aaKnown RBP7.02□□□□□ -1.29
RTN4-205ENST00000394609 ELAC2Q9BQ52 826 aaKnown RBP7.02□□□□□ -1.29
RTN4-205ENST00000394609 TBL1YQ9BQ87 522 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 DHRS4Q9BTZ2 278 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 FSD1LQ9BXM9 530 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 OSBPL1AQ9BXW6 950 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 FAM192AQ9GZU8 254 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 MUC3BQ9H195 1237 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 MAGEH1Q9H213 219 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 CHRAC1Q9NRG0 131 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.02□□□□□ -1.29
RTN4-205ENST00000394609 PLK2Q9NYY3 685 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 PSMC3IPQ9P2W1 217 aaPredicted RBP7.02□□□□□ -1.29
RTN4-205ENST00000394609 DNMT3BQ9UBC3 853 aaKnown RBP7.02□□□□□ -1.29
RTN4-205ENST00000394609 SLC24A2Q9UI40 661 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 STOML2Q9UJZ1 356 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 L3MBTL1Q9Y468 752 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 IKBKGQ9Y6K9 419 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 RPS6KL1Q9Y6S9 549 aa7.02□□□□□ -1.29
RTN4-205ENST00000394609 A0A1B0GVM2 712 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 TMEM120BA0PK00 339 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 TCAF2A6NFQ2 919 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 GOLGA8RI6L899 631 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 LEFTY2O00292 366 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 ERVK-10P10266 1014 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 PTPN2P17706 415 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 KRT4P19013 534 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 PRKCHP24723 683 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 HOXD9P28356 352 aaPredicted RBP7.01□□□□□ -1.29
RTN4-205ENST00000394609 MZF1P28698 734 aaPredicted RBP7.01□□□□□ -1.29
RTN4-205ENST00000394609 GEMP55040 296 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 WNT3AP56704 352 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 SLC7A9P82251 487 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 KLC1Q07866 573 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 CBX2Q14781 532 aaPredicted RBP7.01□□□□□ -1.29
RTN4-205ENST00000394609 POU6F1Q14863 301 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 LRRC14Q15048 493 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 NAPEPLDQ6IQ20 393 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 DENND5AQ6IQ26 1287 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 CXorf57Q6NSI4 855 aaKnown RBP7.01□□□□□ -1.29
RTN4-205ENST00000394609 IRGCQ6NXR0 463 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 LINGO4Q6UY18 593 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 RGS9BPQ6ZS82 235 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 GRASPQ7Z6J2 395 aaPredicted RBP7.01□□□□□ -1.29
RTN4-205ENST00000394609 TRABD2AQ86V40 505 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 LRRC6Q86X45 466 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 RNF135Q8IUD6 432 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 RIBC1Q8N443 379 aaPredicted RBP7.01□□□□□ -1.29
RTN4-205ENST00000394609 SLC25A41Q8N5S1 370 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 TEX26Q8N6G2 289 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 C12orf76Q8N812 135 aaPredicted RBP7.01□□□□□ -1.29
RTN4-205ENST00000394609 DDI1Q8WTU0 396 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 SLC44A1Q8WWI5 657 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 CKAP2Q8WWK9 683 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 ING5Q8WYH8 240 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 MFSD3Q96ES6 412 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 IMP4Q96G21 291 aaKnown RBP7.01□□□□□ -1.29
RTN4-205ENST00000394609 ZNF778Q96MU6 729 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 KLF6Q99612 283 aaPredicted RBP7.01□□□□□ -1.29
RTN4-205ENST00000394609 SEMA3CQ99985 751 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 SLC25A51Q9H1U9 297 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 TRABDQ9H4I3 376 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 PDFQ9HBH1 243 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 ATP13A1Q9HD20 1204 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 ABCF3Q9NUQ8 709 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 MOCS1Q9NZB8 636 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 KLHL14Q9P2G3 628 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 TBC1D30Q9Y2I9 924 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 SH3BP1Q9Y3L3 701 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 HCFC2Q9Y5Z7 792 aa7.01□□□□□ -1.29
RTN4-205ENST00000394609 CCDC195A0A1B0GUA6 201 aa7□□□□□ -1.29
RTN4-205ENST00000394609 ILVBLA1L0T0 632 aa7□□□□□ -1.29
RTN4-205ENST00000394609 CCDC85CA6NKD9 419 aa7□□□□□ -1.29
RTN4-205ENST00000394609 FAM159BA6NKW6 160 aa7□□□□□ -1.29
RTN4-205ENST00000394609 GOLGA8TH3BQL2 631 aa7□□□□□ -1.29
RTN4-205ENST00000394609 PSMD3O43242 534 aa7□□□□□ -1.29
RTN4-205ENST00000394609 KDELR3O43731 214 aa7□□□□□ -1.29
RTN4-205ENST00000394609 SNAP91O60641 907 aa7□□□□□ -1.29
RTN4-205ENST00000394609 MOSPD3O75425 235 aa7□□□□□ -1.29
RTN4-205ENST00000394609 IL2RAP01589 272 aa7□□□□□ -1.29
RTN4-205ENST00000394609 POLBP06746 335 aa7□□□□□ -1.29
RTN4-205ENST00000394609 MMP2P08253 660 aa7□□□□□ -1.29
RTN4-205ENST00000394609 F7P08709 466 aaPredicted RBP7□□□□□ -1.29
RTN4-205ENST00000394609 KRT16P08779 473 aa7□□□□□ -1.29
RTN4-205ENST00000394609 ALDH3A1P30838 453 aa7□□□□□ -1.29
RTN4-205ENST00000394609 ADRA1AP35348 466 aa7□□□□□ -1.29
RTN4-205ENST00000394609 AVPR1AP37288 418 aa7□□□□□ -1.29
RTN4-205ENST00000394609 ABL2P42684 1182 aa7□□□□□ -1.29
RTN4-205ENST00000394609 IFNAR2P48551 515 aa7□□□□□ -1.29
RTN4-205ENST00000394609 NPY2RP49146 381 aa7□□□□□ -1.29
RTN4-205ENST00000394609 OXCT1P55809 520 aa7□□□□□ -1.29
RTN4-205ENST00000394609 ERVK-21P61565 698 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms