RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 CTXN3Q4LDR2 81 aa8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 ZNF648Q5T619 568 aaPredicted RBP8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 RNF187Q5TA31 235 aaPredicted RBP8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 CHSY3Q70JA7 882 aa8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 NPAS4Q8IUM7 802 aa8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 MAP7D3Q8IWC1 876 aa8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 CTAGE3PQ8IX95 158 aa8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 TBL1YQ9BQ87 522 aa8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 TSPYL1Q9H0U9 437 aa8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 ADAMTS6Q9UKP5 1117 aa8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 CNPP09543 421 aaKnown RBP8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 LHCGRP22888 699 aa8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 FDFT1P37268 417 aa8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 SNRPNP63162 240 aaKnown RBP8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 SLC25A3Q00325 362 aa8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 KPNB1Q14974 876 aaKnown RBP8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 PCSK9Q8NBP7 692 aaKnown RBP8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 OR9I1Q8NGQ6 314 aa8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 GLT1D1Q96MS3 346 aa8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 PCDHGC4Q9Y5F7 938 aa8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 DCHS2Q6V1P9 2916 aa8.5□□□□□ -1.05
GAPVD1-204ENST00000394083 CCDC162PA2VCL2 907 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 EPOPA6NHQ4 379 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 SYN3O14994 580 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 GRIA2P42262 883 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 TCHHL1Q5QJ38 904 aaPredicted RBP8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 RNF180Q86T96 592 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 SLC25A41Q8N5S1 370 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 OTUD6BQ8N6M0 293 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 PPP1R36Q96LQ0 422 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 UROC1Q96N76 676 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 EVLQ9UI08 416 aaPredicted RBP8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 MCM8Q9UJA3 840 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 BDP1A6H8Y1 2624 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 SDHDO14521 159 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 MLYCDO95822 493 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 HNRNPLP14866 589 aaKnown RBP eCLIP8.49□□□□□ -1.052e-7■■■□□ 18.8
GAPVD1-204ENST00000394083 ITGAXP20702 1163 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 YWHAQP27348 245 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 EPHA3P29320 983 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 SLC1A6P48664 564 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 AGTR2P50052 363 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 KCNC3Q14003 757 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 TYSND1Q2T9J0 566 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 ZNF551Q7Z340 670 aaPredicted RBP8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 ABI1Q8IZP0 508 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 SLC22A17Q8WUG5 538 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 NT5MQ9NPB1 228 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 SLAMF8Q9P0V8 285 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 KLHL8Q9P2G9 620 aaPredicted RBP8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 STAP1Q9ULZ2 295 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 ETFBP38117 255 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 RING1Q06587 406 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 SPDYAQ5MJ70 313 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 C12orf40Q86WS4 652 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 CCDC117Q8IWD4 279 aaPredicted RBP8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 PIH1D2Q8WWB5 315 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 FOXJ1Q92949 421 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 KLHL32Q96NJ5 620 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 MTG2Q9H4K7 406 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 HMX1Q9NP08 348 aaPredicted RBP8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 ELOVL2Q9NXB9 296 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 MARCH2Q9P0N8 246 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 XPR1Q9UBH6 696 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 DNAJC16Q9Y2G8 782 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 PCDHB12Q9Y5F1 795 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 TBKBP1A7MCY6 615 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 MAP3K7O43318 606 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 TGM5O43548 720 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 KLHL18O94889 574 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 MT-ND3P03897 115 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 TACR2P21452 398 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 CD70P32970 193 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 GP5P40197 560 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 ARL4AP40617 200 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 PLK1P53350 603 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 SPATA2LQ8IUW3 424 aaPredicted RBP8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 DENND1CQ8IV53 801 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 LPGAT1Q92604 370 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 ESAMQ96AP7 390 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 SLC25A51Q9H1U9 297 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 HIPK3Q9H422 1215 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 SLC6A13Q9NSD5 602 aa8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 ARHGEF17Q96PE2 2063 aaPredicted RBP8.49□□□□□ -1.05
GAPVD1-204ENST00000394083 A8MT66 165 aa8.48□□□□□ -1.05
GAPVD1-204ENST00000394083 STK19P49842 368 aaPredicted RBP8.48□□□□□ -1.05
GAPVD1-204ENST00000394083 HNRNPDQ14103 355 aaKnown RBP8.48□□□□□ -1.05
GAPVD1-204ENST00000394083 SPANXN3Q5MJ09 141 aa8.48□□□□□ -1.05
GAPVD1-204ENST00000394083 FBXL19Q6PCT2 694 aa8.48□□□□□ -1.05
GAPVD1-204ENST00000394083 TSPAN33Q86UF1 283 aa8.48□□□□□ -1.05
GAPVD1-204ENST00000394083 OR6K2Q8NGY2 324 aa8.48□□□□□ -1.05
GAPVD1-204ENST00000394083 E2F7Q96AV8 911 aa8.48□□□□□ -1.05
GAPVD1-204ENST00000394083 TBC1D31Q96DN5 1066 aa8.48□□□□□ -1.05
GAPVD1-204ENST00000394083 UBE2OQ9C0C9 1292 aaKnown RBP8.48□□□□□ -1.05
GAPVD1-204ENST00000394083 P2RY12Q9H244 342 aa8.48□□□□□ -1.05
GAPVD1-204ENST00000394083 SENP1Q9P0U3 644 aa8.48□□□□□ -1.05
GAPVD1-204ENST00000394083 TRIM17Q9Y577 477 aa8.48□□□□□ -1.05
GAPVD1-204ENST00000394083 USH1CQ9Y6N9 552 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms