RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 CERCAMQ5T4B2 595 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 USP53Q70EK8 1073 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 STRADAQ7RTN6 431 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 GKN2Q86XP6 184 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 CCNJLQ8IV13 435 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 GPR156Q8NFN8 814 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 OR6C4Q8NGE1 309 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 GPT2Q8TD30 523 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 SLC20A1Q8WUM9 679 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 CASKIN2Q8WXE0 1202 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 CENPIQ92674 756 aaPredicted RBP15.51■□□□□ 0.07
CHMP3-202ENST00000393773 EXOC2Q96KP1 924 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 TMEM74Q96NL1 305 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 RBM15Q96T37 977 aaKnown RBP eCLIP15.51■□□□□ 0.07
CHMP3-202ENST00000393773 KLQ9UEF7 1012 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 OR1A2Q9Y585 309 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 BUB1O43683 1085 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 CYP1A1P04798 512 aaPredicted RBP15.5■□□□□ 0.07
CHMP3-202ENST00000393773 PLEKP08567 350 aaPredicted RBP15.5■□□□□ 0.07
CHMP3-202ENST00000393773 FAM87AP0C7U9 286 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 CTSEP14091 401 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 UCHL3P15374 230 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 WT1P19544 449 aaPredicted RBP15.5■□□□□ 0.07
CHMP3-202ENST00000393773 MMP8P22894 467 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 SUOXP51687 545 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 RAD51Q06609 339 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 ZFP36L1Q07352 338 aaKnown RBP15.5■□□□□ 0.07
CHMP3-202ENST00000393773 INO80DQ53TQ3 878 aaPredicted RBP15.5■□□□□ 0.07
CHMP3-202ENST00000393773 XKR5Q6UX68 686 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 RD3Q7Z3Z2 195 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 TMPRSS9Q7Z410 1059 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 SPRED1Q7Z699 444 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 VASH2Q86V25 355 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 ZSWIM9Q86XI8 627 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 SLITRK4Q8IW52 837 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 SFTPA2Q8IWL1 248 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 RTL3Q8N8U3 475 aaKnown RBP15.5■□□□□ 0.07
CHMP3-202ENST00000393773 NTAN1Q96AB6 310 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 TUBGCP2Q9BSJ2 902 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 APOOQ9BUR5 198 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 PCDH12Q9NPG4 1184 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 WDR70Q9NW82 654 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 FOXJ2Q9P0K8 574 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 IL17BQ9UHF5 180 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 APPL1Q9UKG1 709 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 DGKBQ9Y6T7 804 aa15.5■□□□□ 0.07
CHMP3-202ENST00000393773 PCCBP05166 539 aa15.49■□□□□ 0.07
CHMP3-202ENST00000393773 HTR1BP28222 390 aa15.49■□□□□ 0.07
CHMP3-202ENST00000393773 MTM1Q13496 603 aa15.49■□□□□ 0.07
CHMP3-202ENST00000393773 INPP5AQ14642 412 aa15.49■□□□□ 0.07
CHMP3-202ENST00000393773 ENPP7Q6UWV6 458 aa15.49■□□□□ 0.07
CHMP3-202ENST00000393773 DTX1Q86Y01 620 aa15.49■□□□□ 0.07
CHMP3-202ENST00000393773 PYROXD2Q8N2H3 581 aa15.49■□□□□ 0.07
CHMP3-202ENST00000393773 FAM172AQ8WUF8 416 aa15.49■□□□□ 0.07
CHMP3-202ENST00000393773 HTR3CQ8WXA8 447 aa15.49■□□□□ 0.07
CHMP3-202ENST00000393773 HMCESQ96FZ2 354 aa15.49■□□□□ 0.07
CHMP3-202ENST00000393773 WDR92Q96MX6 357 aa15.49■□□□□ 0.07
CHMP3-202ENST00000393773 C11orf70Q9BRQ4 267 aa15.49■□□□□ 0.07
CHMP3-202ENST00000393773 PDFQ9HBH1 243 aa15.49■□□□□ 0.07
CHMP3-202ENST00000393773 FGF22Q9HCT0 170 aa15.49■□□□□ 0.07
CHMP3-202ENST00000393773 C9orf172C9J069 976 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 SUV39H1O43463 412 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 PRKCSHP14314 528 aaPredicted RBP15.48■□□□□ 0.07
CHMP3-202ENST00000393773 PNLIPP16233 465 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 GLB1P16278 677 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 LIG3P49916 1009 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 GSCP56915 257 aaPredicted RBP15.48■□□□□ 0.07
CHMP3-202ENST00000393773 KIAA1024LP59773 190 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 FMO1Q01740 532 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 PTP4A2Q12974 167 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 SERINC3Q13530 473 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 HLTFQ14527 1009 aaKnown RBP eCLIP15.48■□□□□ 0.07
CHMP3-202ENST00000393773 CAMK4Q16566 473 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 UGP2Q16851 508 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 HSP90AA4PQ58FG1 418 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 MANEAQ5SRI9 462 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 PHLDB2Q86SQ0 1253 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 ZFAND4Q86XD8 727 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 ZNF677Q86XU0 584 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 ZNF354CQ86Y25 554 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 DNAAF5Q86Y56 855 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 FAM114A1Q8IWE2 563 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 PLA2G15Q8NCC3 412 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 ATL2Q8NHH9 583 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 HCAR2Q8TDS4 363 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 OR1E3Q8WZA6 343 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 TMEM159Q96B96 161 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 NCAPGQ9BPX3 1015 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 ARHGAP9Q9BRR9 750 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 FUCA2Q9BTY2 467 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 STK33Q9BYT3 514 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 GANQ9H2C0 597 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 RNF215Q9Y6U7 377 aa15.48■□□□□ 0.07
CHMP3-202ENST00000393773 TMEM202A6NGA9 273 aa15.47■□□□□ 0.07
CHMP3-202ENST00000393773 RASA4BC9J798 803 aa15.47■□□□□ 0.07
CHMP3-202ENST00000393773 RASA4O43374 803 aa15.47■□□□□ 0.07
CHMP3-202ENST00000393773 PRKCGP05129 697 aa15.47■□□□□ 0.07
CHMP3-202ENST00000393773 CHRNB2P17787 502 aa15.47■□□□□ 0.07
CHMP3-202ENST00000393773 XPAP23025 273 aaPredicted RBP15.47■□□□□ 0.07
CHMP3-202ENST00000393773 EPHB2P29323 1055 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms