RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 GGT7Q9UJ14 662 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 PHTF1Q9UMS5 762 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 PCDHB9Q9Y5E1 797 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 RAI2Q9Y5P3 530 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 CACNA1EQ15878 2313 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 A0A1B0GVT2 93 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 SPINT1O43278 529 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 MMP20O60882 483 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 PAK4O96013 591 aaPredicted RBP19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 CPP00450 1065 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 PRLRP16471 622 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 SDHBP21912 280 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 HNRNPA2B1P22626 353 aaKnown RBP19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 CA4P22748 312 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 AKT2P31751 481 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 C21orf59P57076 290 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 FAM193AP78312 1265 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 NIPAL4Q0D2K0 466 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 TRAF2Q12933 501 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 SEL1L2Q5TEA6 688 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 NDUFAF2Q8N183 169 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 TTC13Q8NBP0 860 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 ARRDC2Q8TBH0 407 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 ACTL9Q8TC94 416 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 NETO1Q8TDF5 533 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 ASB12Q8WXK4 309 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 SPOCK2Q92563 424 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 FERMT1Q9BQL6 677 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 C1QTNF2Q9BXJ5 285 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 CEP41Q9BYV8 373 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 TMEM9BQ9NQ34 198 aa19.13■□□□□ 0.65
PDLIM7-204ENST00000393546 PLXNA2O75051 1894 aa19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 WNT9AO14904 365 aa19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 VILLO15195 856 aa19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 TM7SF2O76062 418 aa19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 PGLSO95336 258 aa19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 PRKCGP05129 697 aa19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 PTPN3P26045 913 aa19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 EIF3EP60228 445 aaKnown RBP19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 GRIK2Q13002 908 aa19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 STPG1Q5TH74 334 aa19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 IL27RAQ6UWB1 636 aa19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 MFSD2AQ8NA29 543 aa19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 HTR3CQ8WXA8 447 aa19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 TEKT5Q96M29 485 aa19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 QKIQ96PU8 341 aaKnown RBP eCLIP19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 VAT1Q99536 393 aa19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 WRAP53Q9BUR4 548 aaKnown RBP19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 SLC25A51Q9H1U9 297 aa19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 ANKRD6Q9Y2G4 727 aa19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 ADAMTS9Q9P2N4 1935 aa19.12■□□□□ 0.65
PDLIM7-204ENST00000393546 A0A1W2PR77 199 aa19.11■□□□□ 0.65
PDLIM7-204ENST00000393546 CFAP69A5D8W1 941 aa19.11■□□□□ 0.65
PDLIM7-204ENST00000393546 MAGEC1O60732 1142 aa19.11■□□□□ 0.65
PDLIM7-204ENST00000393546 RBP3P10745 1247 aa19.11■□□□□ 0.65
PDLIM7-204ENST00000393546 MMP12P39900 470 aa19.11■□□□□ 0.65
PDLIM7-204ENST00000393546 CD86P42081 329 aa19.11■□□□□ 0.65
PDLIM7-204ENST00000393546 LIMK1P53667 647 aa19.11■□□□□ 0.65
PDLIM7-204ENST00000393546 CCDC173Q0VFZ6 552 aa19.11■□□□□ 0.65
PDLIM7-204ENST00000393546 WASHC5Q12768 1159 aa19.11■□□□□ 0.65
PDLIM7-204ENST00000393546 DARS2Q6PI48 645 aaKnown RBP19.11■□□□□ 0.65
PDLIM7-204ENST00000393546 IQCHQ86VS3 1027 aa19.11■□□□□ 0.65
PDLIM7-204ENST00000393546 CDKL3Q8IVW4 592 aaPredicted RBP19.11■□□□□ 0.65
PDLIM7-204ENST00000393546 REXO1L1PQ8IX06 675 aa19.11■□□□□ 0.65
PDLIM7-204ENST00000393546 LENG8Q96PV6 779 aaPredicted RBP19.11■□□□□ 0.65
PDLIM7-204ENST00000393546 C1QTNF7Q9BXJ2 289 aa19.11■□□□□ 0.65
PDLIM7-204ENST00000393546 GLOD4Q9HC38 313 aa19.11■□□□□ 0.65
PDLIM7-204ENST00000393546 CDV3Q9UKY7 258 aaKnown RBP19.11■□□□□ 0.65
PDLIM7-204ENST00000393546 HS3ST3A1Q9Y663 406 aa19.11■□□□□ 0.65
PDLIM7-204ENST00000393546 KNL1Q8NG31 2342 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 C4orf47A7E2U8 309 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 CDX4O14627 284 aaPredicted RBP19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 KCNK3O14649 394 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 FZD6O60353 706 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 ZNF189O75820 626 aaPredicted RBP19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 WNT1P04628 370 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 RBL1P28749 1068 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 LIG3P49916 1009 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 EPHB1P54762 984 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 SKOR1P84550 965 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 BNC1Q01954 994 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 SEMG2Q02383 582 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 OVGP1Q12889 678 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 FGL2Q14314 439 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 RSPO4Q2I0M5 234 aaPredicted RBP19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 KIF19Q2TAC6 998 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 DPPA4Q7L190 304 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 PID1Q7Z2X4 250 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 MINDY1Q8N5J2 469 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 FAM174AQ8TBP5 190 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 IMP4Q96G21 291 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 MYOCQ99972 504 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 CARD9Q9H257 536 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 FZD3Q9NPG1 666 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 KLHL8Q9P2G9 620 aaPredicted RBP19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 TRHDEQ9UKU6 1024 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 CHKBQ9Y259 395 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 PPIL1Q9Y3C6 166 aa19.1■□□□□ 0.65
PDLIM7-204ENST00000393546 TLR4O00206 839 aa19.09■□□□□ 0.65
PDLIM7-204ENST00000393546 LZTS3O60299 673 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms