RNA–Protein interactions for RNA: ENST00000392871.6

GTDC1-205, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 2

Gene GTDC1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-205ENST00000392871 SKA1Q96BD8 255 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 ZNF419Q96HQ0 510 aaPredicted RBP4.57□□□□□ -1.68
GTDC1-205ENST00000392871 CCDC140Q96MF4 163 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 ZNF560Q96MR9 790 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 SPATA13Q96N96 652 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 ZNF570Q96NI8 536 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 AGAP3Q96P47 875 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 PPP1R10Q96QC0 940 aaKnown RBP4.57□□□□□ -1.68
GTDC1-205ENST00000392871 GAD1Q99259 594 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 SMOQ99835 787 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 EBNA1BP2Q99848 306 aaKnown RBP4.57□□□□□ -1.68
GTDC1-205ENST00000392871 TBC1D10AQ9BXI6 508 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 NMUR2Q9GZQ4 415 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 UPF3AQ9H1J1 476 aaKnown RBP4.57□□□□□ -1.68
GTDC1-205ENST00000392871 PRDM12Q9H4Q4 367 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 IPPKQ9H8X2 491 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 PIDD1Q9HB75 910 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 PNPLA8Q9NP80 782 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 TXLNGQ9NUQ3 528 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 MIOSQ9NXC5 875 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 GDAP2Q9NXN4 497 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 CLEC1BQ9P126 229 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 HEY2Q9UBP5 337 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 EMCNQ9ULC0 261 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 TTC3P53804 2025 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 C17orf102A2RUQ5 167 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 MEI4A8MW99 385 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 SHISA8B8ZZ34 492 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 NDC80O14777 642 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 XPO1O14980 1071 aaKnown RBP4.57□□□□□ -1.68
GTDC1-205ENST00000392871 DCLK1O15075 740 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 DIAPH2O60879 1101 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 PEX11AO75192 247 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 ENTPD5O75356 428 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 GCATO75600 419 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 DCTN3O75935 186 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 HAUS5O94927 633 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 TIAF1O95411 115 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 TROVE2P10155 538 aaKnown RBP eCLIP4.57□□□□□ -1.68
GTDC1-205ENST00000392871 ERVK-10P10266 1014 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 PTPN1P18031 435 aaKnown RBP4.57□□□□□ -1.68
GTDC1-205ENST00000392871 RHCEP18577 417 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 TPSB2P20231 275 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 HOXC8P31273 242 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 ARL4AP40617 200 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 RPL34P49207 117 aaKnown RBP4.57□□□□□ -1.68
GTDC1-205ENST00000392871 PGFP49763 221 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 SCNN1GP51170 649 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 RPL10AP62906 217 aaKnown RBP4.57□□□□□ -1.68
GTDC1-205ENST00000392871 RHDQ02161 417 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 DEUP1Q05D60 604 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 NIPAL4Q0D2K0 466 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 ZBTB17Q13105 803 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 CRYMQ14894 314 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 ACAP2Q15057 778 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 TPSAB1Q15661 275 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 XKR4Q5GH76 650 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 FAM219BQ5XKK7 198 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 RINLQ6ZS11 566 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 RFX8Q6ZV50 586 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 BHLHA9Q7RTU4 235 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 CHSY1Q86X52 802 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 ZDHHC17Q8IUH5 632 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 ARID3BQ8IVW6 561 aaPredicted RBP4.57□□□□□ -1.68
GTDC1-205ENST00000392871 SIX6OS1Q8N1H7 587 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 TTC39CQ8N584 583 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 COLGALT1Q8NBJ5 622 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 C2CD4AQ8NCU7 369 aaPredicted RBP4.57□□□□□ -1.68
GTDC1-205ENST00000392871 RCBTB1Q8NDN9 531 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 ACVR1CQ8NER5 493 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 OR52K1Q8NGK4 314 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 PPP1R35Q8TAP8 253 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 NSMCE1Q8WV22 266 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 ARNTL2Q8WYA1 636 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 JADE3Q92613 823 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 PGBD4Q96DM1 585 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 PCED1BQ96HM7 432 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 CELF6Q96J87 481 aaKnown RBP4.57□□□□□ -1.68
GTDC1-205ENST00000392871 ZNF778Q96MU6 729 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 TMEM209Q96SK2 561 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 NPY6RQ99463 290 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 HNRNPABQ99729 332 aaKnown RBP4.57□□□□□ -1.68
GTDC1-205ENST00000392871 NCAPGQ9BPX3 1015 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 SYT15Q9BQS2 421 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 EBF4Q9BQW3 602 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 PLCD4Q9BRC7 762 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 DUSP16Q9BY84 665 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 VPS11Q9H270 941 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 LRRC4Q9HBW1 653 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 XPNPEP3Q9NQH7 507 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 DDX43Q9NXZ2 648 aaKnown RBP4.57□□□□□ -1.68
GTDC1-205ENST00000392871 PCDHA11Q9Y5I1 949 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 CDY2AQ9Y6F7 541 aa4.57□□□□□ -1.68
GTDC1-205ENST00000392871 GOLGA8TH3BQL2 631 aa4.56□□□□□ -1.68
GTDC1-205ENST00000392871 EEF2KO00418 725 aaKnown RBP4.56□□□□□ -1.68
GTDC1-205ENST00000392871 FCHO1O14526 889 aa4.56□□□□□ -1.68
GTDC1-205ENST00000392871 DVL2O14641 736 aa4.56□□□□□ -1.68
GTDC1-205ENST00000392871 ITM2AO43736 263 aa4.56□□□□□ -1.68
GTDC1-205ENST00000392871 MGEA5O60502 916 aa4.56□□□□□ -1.68
GTDC1-205ENST00000392871 ANP32DO95626 131 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms