RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 DTLQ9NZJ0 730 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 ATP8A1Q9Y2Q0 1164 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 PCDHA13Q9Y5I0 950 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 ZFC3H1O60293 1989 aaKnown RBP11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 UNC13CQ8NB66 2214 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 TTC24A2A3L6 582 aaPredicted RBP11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 TMEM110-MUSTN1A8MSY1 372 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 NEMP1O14524 444 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 TOR1BO14657 336 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 FPGTO14772 594 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 MATN3O15232 486 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 GM2AP17900 193 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 COMTP21964 271 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 DGKAP23743 735 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 IGFALSP35858 605 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 GJC1P36383 396 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 MMP13P45452 471 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 RABIFP47224 123 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 FOXC1Q12948 553 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 FZD2Q14332 565 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 ZNF235Q14590 738 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 IFI16Q16666 785 aaKnown RBP11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 WSCD2Q2TBF2 565 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 INAVAQ3KP66 663 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 MARC1Q5VT66 337 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 SLC9A4Q6AI14 798 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 LIPIQ6XZB0 460 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 PLD5Q8N7P1 536 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 CXorf40AQ8TE69 158 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 HDAC11Q96DB2 347 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 WRAP53Q9BUR4 548 aaKnown RBP11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 SCNM1Q9BWG6 230 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 CAAP1Q9H8G2 361 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 MBNL1Q9NR56 388 aaKnown RBP11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 AMACRQ9UHK6 382 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 SALL4Q9UJQ4 1053 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 REXO2Q9Y3B8 237 aaKnown RBP11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 PPIL1Q9Y3C6 166 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 NEUROG3Q9Y4Z2 214 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 PCDHGC4Q9Y5F7 938 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 ALG6Q9Y672 507 aa11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 EPN1Q9Y6I3 576 aaPredicted RBP11.47□□□□□ -0.57
IGHV4-28-201ENST00000390612 CFAP47Q6ZTR5 3102 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 A0A1W2PQ67 120 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 RCCD1A6NED2 376 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 HYAL3O43820 417 aaPredicted RBP11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 FZD6O60353 706 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 PIAS2O75928 621 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 NDUFA10O95299 355 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 CSF2P04141 144 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 ITGAVP06756 1048 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 C6P13671 934 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 NME1P15531 152 aaKnown RBP11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 MX2P20592 715 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 LIG3P49916 1009 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 MAXP61244 160 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 YPEL5P62699 121 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 POLR2LP62875 67 aaKnown RBP11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 TRAF2Q12933 501 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 KDM7AQ6ZMT4 941 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 DPPA4Q7L190 304 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 TMTC1Q8IUR5 882 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 TMEM139Q8IV31 216 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 RHOT1Q8IXI2 618 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 BBS5Q8N3I7 341 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 CHCHD4Q8N4Q1 142 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 GATA6Q92908 595 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 CNTNAP3BQ96NU0 1288 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 CNTNAP3Q9BZ76 1288 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 KLF15Q9UIH9 416 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 PNMA8BQ9ULN7 279 aaPredicted RBP11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 TFR2Q9UP52 801 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 APOBEC2Q9Y235 224 aaKnown RBP11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 HYOU1Q9Y4L1 999 aa11.46□□□□□ -0.57
IGHV4-28-201ENST00000390612 LAMA5O15230 3695 aa11.46□□□□□ -0.58
IGHV4-28-201ENST00000390612 PKD1L2Q7Z442 2459 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 LRRD1A4D1F6 860 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 SOWAHDA6NJG2 315 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 TRIM38O00635 465 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 PGLSO95336 258 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 MAP3K6O95382 1288 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 PRKCGP05129 697 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 CCNB1P14635 433 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 SPINK2P20155 84 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 XPAP23025 273 aaPredicted RBP11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 CES1P23141 567 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 CDC25BP30305 580 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 CYLC1P35663 651 aaPredicted RBP11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 CDKN2BP42772 138 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 PEX5P50542 639 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 SEMG2Q02383 582 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 PPIDQ08752 370 aaKnown RBP11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 EIF2B5Q13144 721 aaKnown RBP11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 LRRC14Q15048 493 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 PROX2Q3B8N5 592 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 TIGD7Q6NT04 549 aaPredicted RBP11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 ERAP2Q6P179 960 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 MFSD7Q6UXD7 560 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 RAD9BQ6WBX8 426 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 PTAR1Q7Z6K3 402 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms