RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 DPF3Q92784 378 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 SLCO4A1Q96BD0 722 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 PHF21BQ96EK2 531 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 SLC2A11Q9BYW1 496 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 TRPV6Q9H1D0 765 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 VTI1BQ9UEU0 232 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 ERI2A8K979 691 aaKnown RBP16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 CYBAP13498 195 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 ARCN1P48444 511 aaKnown RBP16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 AGKQ53H12 422 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 PKN3Q6P5Z2 889 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 SETD3Q86TU7 594 aaPredicted RBP16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 TTC16Q8NEE8 873 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 IRAK4Q9NWZ3 460 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 TRHDEQ9UKU6 1024 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 TRIM38O00635 465 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 YWHAQP27348 245 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 DENND5AQ6IQ26 1287 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 MIB1Q86YT6 1006 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 THEM5Q8N1Q8 247 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 PELI3Q8N2H9 469 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 SPPL2BQ8TCT7 592 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 LPGAT1Q92604 370 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 CASP10Q92851 521 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 NTAN1Q96AB6 310 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 FBRSL1Q9HCM7 1045 aaKnown RBP16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 CACNA2D2Q9NY47 1150 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 NDUFA13Q9P0J0 144 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 EPS15L1Q9UBC2 864 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 PHF24Q9UPV7 400 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 AP4S1Q9Y587 144 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 C9JVG2 144 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 PAGE1O75459 146 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 PSMC3P17980 439 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 SLC5A3P53794 718 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 FCGRTP55899 365 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 SCAPQ12770 1279 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 HERC3Q15034 1050 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 REP15Q6BDI9 236 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 CLEC6AQ6EIG7 209 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 CHERPQ8IWX8 916 aaKnown RBP16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 RSPH1Q8WYR4 309 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 ASB9Q96DX5 294 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 MAELQ96JY0 434 aaKnown RBP16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 ZFRQ96KR1 1074 aaKnown RBP16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 OLFM1Q99784 485 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 TBL1YQ9BQ87 522 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 MRPL46Q9H2W6 279 aaKnown RBP16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 CCL22O00626 93 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 TBX18O95935 607 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 CKMT2P17540 419 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 PBX3P40426 434 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 CDH15P55291 814 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 NME5P56597 212 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 YWHAHQ04917 246 aaPredicted RBP16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 BHLHA9Q7RTU4 235 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 CATSPER1Q8NEC5 780 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 CEP70Q8NHQ1 597 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 SH3RF2Q8TEC5 729 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 DLG3Q92796 817 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 SLC45A3Q96JT2 553 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 FCRL2Q96LA5 508 aaPredicted RBP16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 NMUR1Q9HB89 426 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 DMTF1Q9Y222 760 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 Q9Y3F1 56 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 PTCH2Q9Y6C5 1203 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 NCAM2O15394 837 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 MAXP61244 160 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 TRIM25Q14258 630 aaKnown RBP16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 ATAD1Q8NBU5 361 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 DTNBP1Q96EV8 351 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 NOL11Q9H8H0 719 aaKnown RBP16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 NCKIPSDQ9NZQ3 722 aa16.36■□□□□ 0.21
NKX3-1-201ENST00000380871 A0A1W2PQH9 124 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 CDK4P11802 303 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 FASTKQ14296 549 aaKnown RBP16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 RFTN1Q14699 578 aaPredicted RBP16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 HMBOX1Q6NT76 420 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 C14orf80Q86SX3 495 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 LDB1Q86U70 411 aaPredicted RBP16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 HERC6Q8IVU3 1022 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 ATPAF2Q8N5M1 289 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 TTC9BQ8N6N2 239 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 LRCH3Q96II8 777 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 SLC9A7Q96T83 725 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 CAAP1Q9H8G2 361 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 GALNT8Q9NY28 637 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 SLC27A5Q9Y2P5 690 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 CEPT1Q9Y6K0 416 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 SLCO1B7G3V0H7 640 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 SLC22A2O15244 555 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 SEPT4O43236 478 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 F9P00740 461 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 CDH2P19022 906 aaPredicted RBP16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 CXCR3P49682 368 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 TUSC3Q13454 348 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 LRP8Q14114 963 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 IKBKEQ14164 716 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 PRPSAP1Q14558 356 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 PDCD11Q14690 1871 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms