RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 DDX50Q9BQ39 737 aaKnown RBP7.81□□□□□ -1.16
CDKL5-202ENST00000379996 STN1Q9H668 368 aaKnown RBP7.81□□□□□ -1.16
CDKL5-202ENST00000379996 ZNF385DQ9H6B1 395 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 CERS4Q9HA82 394 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 AP4E1Q9UPM8 1137 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 ANKRD36A6QL64 1941 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 A0A0A0MRY4 1105 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 E2F8A0AVK6 867 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 COPEO14579 308 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 GBP2P32456 591 aaPredicted RBP7.81□□□□□ -1.16
CDKL5-202ENST00000379996 HARS2P49590 506 aaKnown RBP7.81□□□□□ -1.16
CDKL5-202ENST00000379996 MLLT6P55198 1093 aaPredicted RBP7.81□□□□□ -1.16
CDKL5-202ENST00000379996 TAF12Q16514 161 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 CDO1Q16878 200 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 MPP7Q5T2T1 576 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 PACS1Q6VY07 963 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 CMTM8Q8IZV2 173 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 PYROXD2Q8N2H3 581 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 SMRP1Q8NCR6 262 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 SPATA13Q96N96 652 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 XAB2Q9HCS7 855 aaKnown RBP7.81□□□□□ -1.16
CDKL5-202ENST00000379996 ARMCX1Q9P291 453 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 H7C0C1 242 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 PER2O15055 1255 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 PLIN3O60664 434 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 RFPL2O75678 378 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 KRT37O76014 449 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 STC2O76061 302 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 MAP3K6O95382 1288 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 SPATA31D3P0C874 917 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 LTBRP36941 435 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 ATP5OP48047 213 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 SERPINB9P50453 376 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 ACTR3P61158 418 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 SLC34A1Q06495 639 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 HNRNPDQ14103 355 aaKnown RBP7.81□□□□□ -1.16
CDKL5-202ENST00000379996 ZNF77Q15935 545 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 SLC5A9Q2M3M2 681 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 C10orf120Q5SQS8 335 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 ZFYVE27Q5T4F4 411 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 SPATA31D4Q6ZUB0 917 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 CHST9Q7L1S5 443 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 ADGRG6Q86SQ4 1221 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 ALDH16A1Q8IZ83 802 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 PPM1NQ8N819 430 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 RIPOR3Q96MK2 946 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 RNF38Q9H0F5 515 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 EPS15L1Q9UBC2 864 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 WASF2Q9Y6W5 498 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 C2orf78A6NCI8 922 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 RFXAPO00287 272 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 LUC7L3O95232 432 aaKnown RBP7.8□□□□□ -1.16
CDKL5-202ENST00000379996 APRTP07741 180 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 GOT1P17174 413 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 CA8P35219 290 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 VHLP40337 213 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 TNK2Q07912 1038 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 TAF11Q15544 211 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 CHI3L2Q15782 390 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 TBCCQ15814 346 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 ZNF783Q6ZMS7 281 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 TMPRSS6Q8IU80 811 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 SMG7Q92540 1137 aaKnown RBP7.8□□□□□ -1.16
CDKL5-202ENST00000379996 FCRL3Q96P31 734 aaPredicted RBP7.8□□□□□ -1.16
CDKL5-202ENST00000379996 GAS2L1Q99501 681 aaPredicted RBP7.8□□□□□ -1.16
CDKL5-202ENST00000379996 CORO1BQ9BR76 489 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 SLC46A2Q9BY10 475 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 TKTL2Q9H0I9 626 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 PRDM12Q9H4Q4 367 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 ZFAND3Q9H8U3 227 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 GPAMQ9HCL2 828 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 DNAJC28Q9NX36 388 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 MARK1Q9P0L2 795 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 ZFATQ9P243 1243 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 IGSF9Q9P2J2 1179 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 ZNF212Q9UDV6 495 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 SLC7A8Q9UHI5 535 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 MAGED2Q9UNF1 606 aaPredicted RBP7.8□□□□□ -1.16
CDKL5-202ENST00000379996 SORCS3Q9UPU3 1222 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 MIA3Q5JRA6 1907 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 ZCWPW2A0A1B0GU75 182 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 DPPA5A6NC42 116 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 A6NJY4 79 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 H3BRJ5 948 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 SCAMP3O14828 347 aaKnown RBP7.8□□□□□ -1.16
CDKL5-202ENST00000379996 CACNG3O60359 315 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 CCNT2O60583 730 aaKnown RBP7.8□□□□□ -1.16
CDKL5-202ENST00000379996 CAPNS1P04632 268 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 SBK3P0C264 359 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 RACK1P63244 317 aaKnown RBP7.8□□□□□ -1.16
CDKL5-202ENST00000379996 KRT81Q14533 505 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 RCN1Q15293 331 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 INSCQ1MX18 579 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 MS4A13Q5J8X5 152 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 LRRC74BQ6ZQY2 392 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 HTR3CQ8WXA8 447 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 BRD8Q9H0E9 1235 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 THAP1Q9NVV9 213 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 SFMBT1Q9UHJ3 866 aa7.8□□□□□ -1.16
CDKL5-202ENST00000379996 TAGLN3Q9UI15 199 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms