RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 ASB2Q96Q27 587 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 TRMT13Q9NUP7 481 aaKnown RBP8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 FNIP2Q9P278 1114 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 PRKAG2Q9UGJ0 569 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 PRR12Q9ULL5 1215 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 SNCAIPQ9Y6H5 919 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 KDM3AQ9Y4C1 1321 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 ATRNL1Q5VV63 1379 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 HEATR9A2RTY3 570 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 RAB19A4D1S5 217 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 TNFRSF21O75509 655 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 PIGNO95427 931 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 BMP2P12643 396 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 NDST1P52848 882 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 NCS1P62166 190 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 DGCR6Q14129 220 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 BTBD16Q32M84 506 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 EPC2Q52LR7 807 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 TRAPPC3LQ5T215 181 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 CACHD1Q5VU97 1274 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 TMEM198Q66K66 360 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 PIK3C3Q8NEB9 887 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 BEST2Q8NFU1 509 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 OR13J1Q8NGT2 312 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 MAPK15Q8TD08 544 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 RSAD2Q8WXG1 361 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 PHF21AQ96BD5 680 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 ACSF2Q96CM8 615 aaPredicted RBP8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 NT5C1BQ96P26 610 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 GAD1Q99259 594 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 C12orf57Q99622 126 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 YTHDF1Q9BYJ9 559 aaKnown RBP8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 SLC6A17Q9H1V8 727 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 SP110Q9HB58 689 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 PCDH9Q9HC56 1237 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 SNX15Q9NRS6 342 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 SPATA6Q9NWH7 488 aaPredicted RBP8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 RAB20Q9NX57 234 aa8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 SMPD3Q9NY59 655 aaPredicted RBP8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 SAE1Q9UBE0 346 aaPredicted RBP8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 NUFIP1Q9UHK0 495 aaKnown RBP8.56□□□□□ -1.04
NHLRC3-201ENST00000379599 HNRNPCL2B2RXH8 293 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 H0Y626 953 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 AXIN1O15169 862 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 CCNE2O96020 404 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 CALCAP01258 141 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 KRT1P04264 644 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 IL7RP16871 459 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 GARSP41250 739 aaKnown RBP8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 PLIN5Q00G26 463 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 ELOAQ14241 798 aaKnown RBP8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 MFSD13AQ14CX5 517 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 UGP2Q16851 508 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 TYW3Q6IPR3 259 aaKnown RBP8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 KIAA1324Q6UXG2 1013 aaKnown RBP8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 ZNF517Q6ZMY9 492 aaPredicted RBP8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 ZNF767PQ75MW2 155 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 C11orf96Q7Z7L8 435 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 DHFR2Q86XF0 187 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 NLGN4XQ8N0W4 816 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 TAGAPQ8N103 731 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 PACRGLQ8N7B6 248 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 OR7D4Q8NG98 312 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 SLC2A14Q8TDB8 520 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 SORT1Q99523 831 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 ACO2Q99798 780 aaKnown RBP8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 PITHD1Q9GZP4 211 aaPredicted RBP8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 IFT46Q9NQC8 304 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 NPAP1Q9NZP6 1156 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 EIF3KQ9UBQ5 218 aaKnown RBP8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 ASTN1O14525 1302 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 MICAL3Q7RTP6 2002 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 CCDC182A6NF36 153 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 USP17L12C9JPN9 530 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 USP17L21D6R901 530 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 MEIS1O00470 390 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 TMEM63AO94886 807 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 POU2F1P14859 743 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 IL10P22301 178 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 FASP25445 335 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 CRHR1P34998 444 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 CCT3P49368 545 aaKnown RBP8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 HARS2P49590 506 aaKnown RBP8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 PCBP1Q15365 356 aaKnown RBP eCLIP8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 OTUD3Q5T2D3 398 aaPredicted RBP8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 RSBN1LQ6PCB5 846 aaPredicted RBP8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 RAB43Q86YS6 212 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 EPHX4Q8IUS5 362 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 ADGRF2Q8IZF7 708 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 ZNF781Q8N8C0 355 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 PNMA1Q8ND90 353 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 UBASH3BQ8TF42 649 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 CHAC2Q8WUX2 184 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 NUAK2Q9H093 628 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 BCAS3Q9H6U6 928 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 ZNF556Q9HAH1 456 aa8.55□□□□□ -1.04
NHLRC3-201ENST00000379599 INTS7Q9NVH2 962 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms