RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 CD248Q9HCU0 757 aa10.55□□□□□ -0.72
POLR2J3-201ENST00000379340 TRPC7Q9HCX4 862 aa10.55□□□□□ -0.72
POLR2J3-201ENST00000379340 UBA2Q9UBT2 640 aaPredicted RBP10.55□□□□□ -0.72
POLR2J3-201ENST00000379340 SLC2A6Q9UGQ3 507 aa10.55□□□□□ -0.72
POLR2J3-201ENST00000379340 RUVBL2Q9Y230 463 aaKnown RBP10.55□□□□□ -0.72
POLR2J3-201ENST00000379340 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.55□□□□□ -0.72
POLR2J3-201ENST00000379340 RAP2CQ9Y3L5 183 aa10.55□□□□□ -0.72
POLR2J3-201ENST00000379340 PRRC2BQ5JSZ5 2229 aaKnown RBP10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 A0A1B0GVM2 712 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 FAM86C2PA6NEL3 165 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 TCAF2A6NFQ2 919 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 C2orf71A6NGG8 1288 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 GSC2O15499 205 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 PHGDHO43175 533 aaKnown RBP10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 ADAM12O43184 909 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 KDELR3O43731 214 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 MAGEC1O60732 1142 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 MYOGP15173 224 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 HMGA1P17096 107 aaKnown RBP10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 HOXD9P28356 352 aaPredicted RBP10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 PRDX6P30041 224 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 SLC6A4P31645 630 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 ACVRL1P37023 503 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 ABCG1P45844 678 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 ALDH1A3P47895 512 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 OXCT1P55809 520 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 PRAMEP78395 509 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 NSUN2Q08J23 767 aaKnown RBP eCLIP10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 PRKAA1Q13131 559 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 RCN2Q14257 317 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 TAF12Q16514 161 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 PREPLQ4J6C6 727 aaPredicted RBP10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 FSCBQ5H9T9 825 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 KLC3Q6P597 504 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 HERC6Q8IVU3 1022 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 GPR65Q8IYL9 337 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 KIRREL3Q8IZU9 778 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 CENPLQ8N0S6 344 aaPredicted RBP10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 TEX9Q8N6V9 391 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 ACVR1CQ8NER5 493 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 OR13J1Q8NGT2 312 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 GPR150Q8NGU9 434 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 AGAP11Q8TF27 550 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 KCTD4Q8WVF5 259 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 PRR11Q96HE9 360 aaPredicted RBP10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 MIPEPQ99797 713 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 CLSTN3Q9BQT9 956 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 CADM1Q9BY67 442 aaKnown RBP10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 PPP1R12CQ9BZL4 782 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 ILKAPQ9H0C8 392 aaPredicted RBP10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 NOP53Q9NZM5 478 aaKnown RBP10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 VTI1BQ9UEU0 232 aa10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 ARIH1Q9Y4X5 557 aaPredicted RBP10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 ZFP37Q9Y6Q3 630 aaPredicted RBP10.54□□□□□ -0.72
POLR2J3-201ENST00000379340 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 A8MUI8 341 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 TARM1B6A8C7 271 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 RFXAPO00287 272 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 ZNF195O14628 629 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 COCHO43405 550 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 NPHS1O60500 1241 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 NDST3O95803 873 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 ENO1P06733 434 aaKnown RBP10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 RHOCP08134 193 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 RBP1P09455 135 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 LAG3P18627 525 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 OGNP20774 298 aaKnown RBP10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 SAT1P21673 171 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 IDH3AP50213 366 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 ALDH18A1P54886 795 aaKnown RBP10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 TAS2R39P59534 338 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 DNAJB13P59910 316 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 CREMQ03060 361 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 ZNF177Q13360 481 aaPredicted RBP10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 RAB33AQ14088 237 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 FAM83EQ2M2I3 478 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 AGAP9Q5VTM2 703 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 FAM45BPQ6NSW5 357 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 EPGNQ6UW88 154 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 RINLQ6ZS11 566 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 KDELC2Q7Z4H8 507 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 DEFB128Q7Z7B8 93 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 CIR1Q86X95 450 aaPredicted RBP10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 CILP2Q8IUL8 1156 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 SLC39A11Q8N1S5 342 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 FSTL5Q8N475 847 aaPredicted RBP10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 TMEM151AQ8N4L1 468 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 GPATCH11Q8N954 259 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 TDRD5Q8NAT2 981 aaKnown RBP10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 FAM45AQ8TCE6 357 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 BRSK1Q8TDC3 778 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 TMEM169Q96HH4 297 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 ANKRD27Q96NW4 1050 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 GPR78Q96P69 363 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 PSKH2Q96QS6 385 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 NUDCD1Q96RS6 583 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 EBF4Q9BQW3 602 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 TACO1Q9BSH4 297 aaKnown RBP10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 CINPQ9BW66 212 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms