RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 TEX35Q5T0J7 233 aa13.99□□□□□ -0.17
UPK1A-202ENST00000379013 BRAT1Q6PJG6 821 aa13.99□□□□□ -0.17
UPK1A-202ENST00000379013 B4GALNT4Q76KP1 1039 aa13.99□□□□□ -0.17
UPK1A-202ENST00000379013 PPIL6Q8IXY8 311 aa13.99□□□□□ -0.17
UPK1A-202ENST00000379013 CNTD1Q8N815 330 aa13.99□□□□□ -0.17
UPK1A-202ENST00000379013 OR2A12Q8NGT7 310 aa13.99□□□□□ -0.17
UPK1A-202ENST00000379013 OR2T3Q8NH03 318 aa13.99□□□□□ -0.17
UPK1A-202ENST00000379013 LRRN4Q8WUT4 740 aa13.99□□□□□ -0.17
UPK1A-202ENST00000379013 PTPRN2Q92932 1015 aa13.99□□□□□ -0.17
UPK1A-202ENST00000379013 EXOC2Q96KP1 924 aa13.99□□□□□ -0.17
UPK1A-202ENST00000379013 TSPYL1Q9H0U9 437 aa13.99□□□□□ -0.17
UPK1A-202ENST00000379013 TNKS2Q9H2K2 1166 aa13.99□□□□□ -0.17
UPK1A-202ENST00000379013 ZDHHC6Q9H6R6 413 aa13.99□□□□□ -0.17
UPK1A-202ENST00000379013 C10orf88Q9H8K7 445 aa13.99□□□□□ -0.17
UPK1A-202ENST00000379013 WHRNQ9P202 907 aa13.99□□□□□ -0.17
UPK1A-202ENST00000379013 TPX2Q9ULW0 747 aaKnown RBP13.99□□□□□ -0.17
UPK1A-202ENST00000379013 SHOC2Q9UQ13 582 aa13.99□□□□□ -0.17
UPK1A-202ENST00000379013 ASCC3Q8N3C0 2202 aaKnown RBP13.99□□□□□ -0.17
UPK1A-202ENST00000379013 DNALI1O14645 258 aaPredicted RBP13.98□□□□□ -0.17
UPK1A-202ENST00000379013 AP2A1O95782 977 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 APRTP07741 180 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 NDUFV2P19404 249 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 HLA-DPA1P20036 260 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 PRKCHP24723 683 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 VPS41P49754 854 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 DSC2Q02487 901 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 CUL1Q13616 776 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 LAMB3Q13751 1172 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 MORF4L2Q15014 288 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 TRIP13Q15645 432 aaPredicted RBP13.98□□□□□ -0.17
UPK1A-202ENST00000379013 ATXN7L2Q5T6C5 722 aaPredicted RBP13.98□□□□□ -0.17
UPK1A-202ENST00000379013 C9orf64Q5T6V5 341 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 ARMC12Q5T9G4 340 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 ARMC3Q5W041 872 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 ZNF776Q68DI1 518 aaPredicted RBP13.98□□□□□ -0.17
UPK1A-202ENST00000379013 NCEH1Q6PIU2 408 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 DPY19L3Q6ZPD9 716 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 ARMCX6Q7L4S7 300 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 IFT20Q8IY31 132 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 PGBD5Q8N414 524 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 FEM1CQ96JP0 617 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 LRRC1Q9BTT6 524 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 NOD2Q9HC29 1040 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 EVLQ9UI08 416 aaPredicted RBP13.98□□□□□ -0.17
UPK1A-202ENST00000379013 CDV3Q9UKY7 258 aaKnown RBP13.98□□□□□ -0.17
UPK1A-202ENST00000379013 NEU2Q9Y3R4 380 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 PCDHGA5Q9Y5G8 931 aa13.98□□□□□ -0.17
UPK1A-202ENST00000379013 NUMA1Q14980 2115 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 MUSKO15146 869 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 SIN3BO75182 1162 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 ZNF821O75541 412 aaPredicted RBP13.97□□□□□ -0.17
UPK1A-202ENST00000379013 RHOBTB1O94844 696 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 DNTTP04053 509 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 ACADMP11310 421 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 HLA-EP13747 358 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 XPAP23025 273 aaPredicted RBP13.97□□□□□ -0.17
UPK1A-202ENST00000379013 CD68P34810 354 aaPredicted RBP13.97□□□□□ -0.17
UPK1A-202ENST00000379013 MAGEA6P43360 314 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 GRIA4P48058 902 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 EPHB1P54762 984 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 IRX4P78413 519 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 GDPD4Q6W3E5 623 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 KLHDC8BQ8IXV7 354 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 PGBD3Q8N328 593 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 NOA1Q8NC60 698 aaKnown RBP13.97□□□□□ -0.17
UPK1A-202ENST00000379013 ARRDC2Q8TBH0 407 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 GRIN3AQ8TCU5 1115 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 NETO1Q8TDF5 533 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.97□□□□□ -0.17
UPK1A-202ENST00000379013 SPOCK2Q92563 424 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 MRGPRX1Q96LB2 322 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 RBM15Q96T37 977 aaKnown RBP eCLIP13.97□□□□□ -0.17
UPK1A-202ENST00000379013 TRIM51Q9BSJ1 452 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 TDRD1Q9BXT4 1180 aaKnown RBP13.97□□□□□ -0.17
UPK1A-202ENST00000379013 FOXP3Q9BZS1 431 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 MKRN2Q9H000 416 aaKnown RBP13.97□□□□□ -0.17
UPK1A-202ENST00000379013 RSPH9Q9H1X1 276 aaPredicted RBP13.97□□□□□ -0.17
UPK1A-202ENST00000379013 SUV39H2Q9H5I1 410 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 ETNK1Q9HBU6 452 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 XAB2Q9HCS7 855 aaKnown RBP13.97□□□□□ -0.17
UPK1A-202ENST00000379013 PRSS16Q9NQE7 514 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 FSCN3Q9NQT6 498 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 DKK3Q9UBP4 350 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 MTRF1LQ9UGC7 380 aaKnown RBP13.97□□□□□ -0.17
UPK1A-202ENST00000379013 RAI2Q9Y5P3 530 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 ACTL7AQ9Y615 435 aa13.97□□□□□ -0.17
UPK1A-202ENST00000379013 IGHV1OR15-9A0A0B4J2B8 117 aa13.96□□□□□ -0.17
UPK1A-202ENST00000379013 KPNA3O00505 521 aaPredicted RBP13.96□□□□□ -0.17
UPK1A-202ENST00000379013 CDX4O14627 284 aaPredicted RBP13.96□□□□□ -0.17
UPK1A-202ENST00000379013 RIOK3O14730 519 aaKnown RBP13.96□□□□□ -0.17
UPK1A-202ENST00000379013 PMPCBO75439 489 aa13.96□□□□□ -0.17
UPK1A-202ENST00000379013 LEFTY1O75610 366 aa13.96□□□□□ -0.17
UPK1A-202ENST00000379013 SEC31AO94979 1220 aaKnown RBP13.96□□□□□ -0.17
UPK1A-202ENST00000379013 NDST3O95803 873 aa13.96□□□□□ -0.17
UPK1A-202ENST00000379013 IL1BP01584 269 aa13.96□□□□□ -0.17
UPK1A-202ENST00000379013 FGF1P05230 155 aa13.96□□□□□ -0.17
UPK1A-202ENST00000379013 UGT2B4P06133 528 aa13.96□□□□□ -0.17
UPK1A-202ENST00000379013 ZSCAN5DPP0CG00 497 aa13.96□□□□□ -0.17
UPK1A-202ENST00000379013 ETS1P14921 441 aa13.96□□□□□ -0.17
UPK1A-202ENST00000379013 C5AR1P21730 350 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms