RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 DUSP6Q16828 381 aa17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 ZNF789Q5FWF6 425 aa17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 N4BP2L1Q5TBK1 243 aaPredicted RBP17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 KYAT3Q6YP21 454 aaKnown RBP17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 PTAR1Q7Z6K3 402 aaPredicted RBP17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 CLEC14AQ86T13 490 aa17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 SRLQ86TD4 932 aa17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 PLD6Q8N2A8 252 aaKnown RBP17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 MDGA1Q8NFP4 955 aa17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 OR13C4Q8NGS5 318 aa17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 SMG7Q92540 1137 aaKnown RBP17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 PEX13Q92968 403 aa17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 IRF7Q92985 503 aa17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 TBATAQ96M53 351 aa17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 TM6SF2Q9BZW4 377 aa17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 NKX2-4Q9H2Z4 354 aa17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 MFSD1Q9H3U5 465 aa17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 SUDS3Q9H7L9 328 aaPredicted RBP17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 ZNF358Q9NW07 568 aa17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 A0A096LPK6 155 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 EPOPA6NHQ4 379 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 NEDD8-MDP1E9PL57 170 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 ZNF821O75541 412 aaPredicted RBP17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 HAUS5O94927 633 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 C2P06681 752 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 TCF3P15923 654 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 HADHAP40939 763 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 CTSOP43234 321 aaPredicted RBP17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 PGGT1BP53609 377 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 TMPRSS15P98073 1019 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 IRF9Q00978 393 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 PITRM1Q5JRX3 1037 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 TMC5Q6UXY8 1006 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 KIAA0408Q6ZU52 694 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 OR6P1Q8NGX9 317 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 GDPD5Q8WTR4 605 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 CABS1Q96KC9 395 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 LRRC3BQ96PB8 259 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 BBS2Q9BXC9 721 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 PIDD1Q9HB75 910 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 SPHK2Q9NRA0 654 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 FBXO6Q9NRD1 293 aaPredicted RBP17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 TMEM216Q9P0N5 145 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 MARCH4Q9P2E8 410 aaPredicted RBP17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 RIMKLBQ9ULI2 386 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 WNT6Q9Y6F9 365 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 NUP210Q8TEM1 1887 aaPredicted RBP17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 ANKRD66B4E2M5 251 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 FZD6O60353 706 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 PLIN3O60664 434 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 MPOP05164 745 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 SLC8A1P32418 973 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 ZNF140P52738 457 aaPredicted RBP17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 PRAMEP78395 509 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 IRX4P78413 519 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 LAMB3Q13751 1172 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 KCNC3Q14003 757 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 INSCQ1MX18 579 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 FUT11Q495W5 492 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 RALGPS1Q5JS13 557 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 CNSTQ6PJW8 725 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 OTOAQ7RTW8 1153 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 SPATA21Q7Z572 469 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 CILP2Q8IUL8 1156 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 SLC41A1Q8IVJ1 513 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 CALML6Q8TD86 181 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 PDCD6IPQ8WUM4 868 aaKnown RBP17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 SIRPGQ9P1W8 387 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 TBC1D14Q9P2M4 693 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 ZMYM5Q9UJ78 669 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 STARD13Q9Y3M8 1113 aa17.44■□□□□ 0.38
THUMPD2-201ENST00000378727 PAPLNO95428 1278 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 BPGMP07738 259 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 LEPRP48357 1165 aaKnown RBP17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 CD151P48509 253 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 AP1S1P61966 158 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 SLC12A1Q13621 1099 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 PTPRRQ15256 657 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 LY6G5CQ5SRR4 150 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 CES4AQ5XG92 561 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 SPATS2Q86XZ4 545 aaKnown RBP17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 ADGRG2Q8IZP9 1017 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 OR6K2Q8NGY2 324 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 STYXQ8WUJ0 223 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 RPL10LQ96L21 214 aaKnown RBP17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 ADGRE3Q9BY15 652 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 USP15Q9Y4E8 981 aaPredicted RBP17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 PRRC2BQ5JSZ5 2229 aaKnown RBP17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 FAM95CA0A1B0GW59 222 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 CCDC162PA2VCL2 907 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 RPP40O75818 363 aaKnown RBP17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 CRTAMO95727 393 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 GOT2P00505 430 aaKnown RBP17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 PROCP04070 461 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 BMP1P13497 986 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 TYRP14679 529 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 SAT1P21673 171 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 STK19P49842 368 aaPredicted RBP17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 IFT88Q13099 833 aa17.43■□□□□ 0.38
THUMPD2-201ENST00000378727 ITIH4Q14624 930 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms