RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 UTP6Q9NYH9 597 aaKnown RBP16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 ANKRD6Q9Y2G4 727 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 PLXNB2O15031 1838 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 MBLAC1A4D2B0 266 aaPredicted RBP16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 MEIS3P2A8K0S8 358 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 DLX3O60479 287 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 SLC7A1P30825 629 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 HADHAP40939 763 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 MPP1Q00013 466 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 PFKPQ01813 784 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 SLC12A1Q13621 1099 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 PRPSAP1Q14558 356 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 POU6F1Q14863 301 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 KCTD21Q4G0X4 260 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 PDCD4Q53EL6 469 aaKnown RBP16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 INTS6LQ5JSJ4 861 aaKnown RBP16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 TWF2Q6IBS0 349 aaKnown RBP16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 FAM35AQ86V20 835 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 ZNF786Q8N393 782 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 CCNYL1Q8N7R7 359 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 RDH11Q8TC12 318 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 SENP8Q96LD8 212 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 VAT1Q99536 393 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 EFHD1Q9BUP0 239 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 KIFC1Q9BW19 673 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 CNGB3Q9NQW8 809 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 DUS2Q9NX74 493 aaKnown RBP16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 TUBA8Q9NY65 449 aaPredicted RBP16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 TMEM98Q9Y2Y6 226 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 ZNF701M0R085 212 aaPredicted RBP16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 GIPC1O14908 333 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 IDO1P14902 403 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 GJA9P57773 515 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 RALGDSQ12967 914 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 TGFBIQ15582 683 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 IQSEC1Q6DN90 963 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 HMBOX1Q6NT76 420 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 RWDD4Q6NW29 188 aaKnown RBP16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 TTC33Q6PID6 262 aaPredicted RBP16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 ARHGAP36Q6ZRI8 547 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 CEP97Q8IW35 865 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 STYXQ8WUJ0 223 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 BORCS5Q969J3 196 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 TOP1MTQ969P6 601 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 NXNL1Q96CM4 212 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 RHOBTB2Q9BYZ6 727 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 ZNF408Q9H9D4 720 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 XPR1Q9UBH6 696 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 DOLKQ9UPQ8 538 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 ACOT9Q9Y305 439 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 MRPL42Q9Y6G3 142 aaKnown RBP16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 FAM155AB1AL88 458 aaPredicted RBP16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 TMEM233B4DJY2 109 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 TMX2-CTNND1H3BSU7 103 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 LRPAP1P30533 357 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 ACADVLP49748 655 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 RAB15P59190 212 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 ZNF829Q3KNS6 432 aaPredicted RBP16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 GPR142Q7Z601 462 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 SPNS2Q8IVW8 549 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 TFAP2CQ92754 450 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 RNF34Q969K3 372 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 SLC10A4Q96EP9 437 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 UNC93B1Q9H1C4 597 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 RRAGCQ9HB90 399 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 SLC38A7Q9NVC3 462 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 COQ6Q9Y2Z9 468 aa16.71■□□□□ 0.27
PCDHA1-201ENST00000378133 HEATR9A2RTY3 570 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 TARM1B6A8C7 271 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 DFFAO00273 331 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 SOCS2O14508 198 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 ATE1O95260 518 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 F2P00734 622 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 AFF1P51825 1210 aaKnown RBP16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 LRRC8EQ6NSJ5 796 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 ESRP1Q6NXG1 681 aaKnown RBP16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 CHSY3Q70JA7 882 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 MFSD6LQ8IWD5 586 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 CPNE9Q8IYJ1 553 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 DDHD1Q8NEL9 900 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 DPF3Q92784 378 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 SGF29Q96ES7 293 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 PGAP3Q96FM1 320 aaPredicted RBP16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 SIK2Q9H0K1 926 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 SELENONQ9NZV5 590 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 TIPRLO75663 272 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 OCM2P0CE71 109 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 OCMP0CE72 109 aaPredicted RBP16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 HSPA1AP0DMV8 641 aaKnown RBP16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 HSPA1BP0DMV9 641 aaKnown RBP16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 PSMD8P48556 350 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 PRKAA2P54646 552 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 C21orf59P57076 290 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 PRKCQQ04759 706 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 STX5Q13190 355 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 PPP4R4Q6NUP7 873 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 PKN3Q6P5Z2 889 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 IPMKQ8NFU5 416 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 PBXIP1Q96AQ6 731 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 CXorf21Q9HAI6 301 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms