RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 DCAKDQ8WVC6 231 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 SCG3Q8WXD2 468 aaKnown RBP8.16□□□□□ -1.1
CKAP2-203ENST00000378037 C17orf80Q9BSJ5 609 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 WWP1Q9H0M0 922 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 ATG10Q9H0Y0 220 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 EBF3Q9H4W6 596 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 MARCH4Q9P2E8 410 aaPredicted RBP8.16□□□□□ -1.1
CKAP2-203ENST00000378037 CNTN6Q9UQ52 1028 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 RAI2Q9Y5P3 530 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 TEX264Q9Y6I9 313 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 VPS13AQ96RL7 3174 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 LDB2O43679 373 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 LRATO95237 230 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 S100BP04271 92 aaPredicted RBP8.15□□□□□ -1.1
CKAP2-203ENST00000378037 CNPP09543 421 aaKnown RBP8.15□□□□□ -1.1
CKAP2-203ENST00000378037 LINC00032P0C843 101 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 UBTFL6P0CB48 400 aaPredicted RBP8.15□□□□□ -1.1
CKAP2-203ENST00000378037 ZCCHC18P0CG32 403 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 PSMC3P17980 439 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 LRPAP1P30533 357 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 MC4RP32245 332 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 CDH5P33151 784 aaPredicted RBP8.15□□□□□ -1.1
CKAP2-203ENST00000378037 CD68P34810 354 aaPredicted RBP8.15□□□□□ -1.1
CKAP2-203ENST00000378037 RGRP47804 291 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 MLLT6P55198 1093 aaPredicted RBP8.15□□□□□ -1.1
CKAP2-203ENST00000378037 TPD52P55327 224 aaPredicted RBP8.15□□□□□ -1.1
CKAP2-203ENST00000378037 CCDC15Q0P6D6 951 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 ACAD11Q709F0 780 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 SNX32Q86XE0 403 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 AGGF1Q8N302 714 aaeCLIP8.15□□□□□ -1.14e-21■□□□□ 10
CKAP2-203ENST00000378037 LINC01465Q8N7H1 131 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 UBR7Q8N806 425 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 PTGR2Q8N8N7 351 aaPredicted RBP8.15□□□□□ -1.1
CKAP2-203ENST00000378037 KREMEN2Q8NCW0 462 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 N4BP2L2Q92802 583 aaPredicted RBP8.15□□□□□ -1.1
CKAP2-203ENST00000378037 NCLNQ969V3 563 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 MTBPQ96DY7 904 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 BTN2A3PQ96KV6 586 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 MRPL9Q9BYD2 267 aaKnown RBP8.15□□□□□ -1.1
CKAP2-203ENST00000378037 SENP1Q9P0U3 644 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 TRMT6Q9UJA5 497 aaKnown RBP8.15□□□□□ -1.1
CKAP2-203ENST00000378037 PCDHB8Q9UN66 801 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 BCLAF3A2AJT9 711 aaKnown RBP8.15□□□□□ -1.1
CKAP2-203ENST00000378037 STX16-NPEPL1H3BU86 382 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 GLUD1P00367 558 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 FGBP02675 491 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 SERPINB8P50452 374 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 ST8SIA6P61647 398 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 GRM2Q14416 872 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 KPNB1Q14974 876 aaKnown RBP8.15□□□□□ -1.1
CKAP2-203ENST00000378037 CPSF6Q16630 551 aaKnown RBP eCLIP8.15□□□□□ -1.1
CKAP2-203ENST00000378037 ARL13AQ5H913 290 aaPredicted RBP8.15□□□□□ -1.1
CKAP2-203ENST00000378037 RALGPS1Q5JS13 557 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 CPNE9Q8IYJ1 553 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 NIPA2Q8N8Q9 360 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 CXorf38Q8TB03 319 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 SPPL2BQ8TCT7 592 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 SH3RF2Q8TEC5 729 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 POF1BQ8WVV4 589 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 SCAMP4Q969E2 229 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.15□□□□□ -1.1
CKAP2-203ENST00000378037 SH3KBP1Q96B97 665 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 SPDL1Q96EA4 605 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 SPATA16Q9BXB7 569 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 SEMA6AQ9H2E6 1030 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 CASS4Q9NQ75 786 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 PSMD13Q9UNM6 376 aa8.15□□□□□ -1.1
CKAP2-203ENST00000378037 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.15□□□□□ -1.11
CKAP2-203ENST00000378037 UBXN8O00124 270 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 SMAD6O43541 496 aaKnown RBP8.15□□□□□ -1.11
CKAP2-203ENST00000378037 AKAP10O43572 662 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 ZBTB14O43829 449 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 LZTS3O60299 673 aaPredicted RBP8.15□□□□□ -1.11
CKAP2-203ENST00000378037 ACSL4O60488 711 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 AP2A1O95782 977 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 GOT2P00505 430 aaKnown RBP8.15□□□□□ -1.11
CKAP2-203ENST00000378037 TM4SF4P48230 202 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 BCL2L1Q07817 233 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 TNK2Q07912 1038 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 ELAVL2Q12926 359 aaKnown RBP8.15□□□□□ -1.11
CKAP2-203ENST00000378037 ABRQ12979 859 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 PRKG2Q13237 762 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 TEAD2Q15562 447 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 SLC44A4Q53GD3 710 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 SLC9A4Q6AI14 798 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 YAF2Q8IY57 180 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 FSTL5Q8N475 847 aaPredicted RBP8.15□□□□□ -1.11
CKAP2-203ENST00000378037 TMEM199Q8N511 208 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 RTL3Q8N8U3 475 aaKnown RBP8.15□□□□□ -1.11
CKAP2-203ENST00000378037 OR9I1Q8NGQ6 314 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 TEKT4Q8WW24 435 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 SNX19Q92543 992 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 IGSF21Q96ID5 467 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 KCNA7Q96RP8 456 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 GPR21Q99679 349 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 TBC1D10AQ9BXI6 508 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 ILKAPQ9H0C8 392 aaPredicted RBP8.15□□□□□ -1.11
CKAP2-203ENST00000378037 IRAK4Q9NWZ3 460 aa8.15□□□□□ -1.11
CKAP2-203ENST00000378037 TDRKHQ9Y2W6 561 aaKnown RBP8.15□□□□□ -1.11
CKAP2-203ENST00000378037 LOC102724159A0A0B4J2E5 919 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms