RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 CRY1Q16526 586 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 BMT2Q1RMZ1 405 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 KCNT2Q6UVM3 1135 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 FAM180AQ6UWF9 173 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 NANOGNBQ7Z5D8 188 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 GALNT13Q8IUC8 556 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 EFCAB3Q8N7B9 438 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 SPRTNQ9H040 489 aaPredicted RBP10.87□□□□□ -0.67
HIF3A-205ENST00000377670 TCF7L2Q9NQB0 619 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 NINJ2Q9NZG7 142 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 SH3BP4Q9P0V3 963 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 CACNG4Q9UBN1 327 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 PHRF1Q9P1Y6 1649 aaKnown RBP10.87□□□□□ -0.67
HIF3A-205ENST00000377670 SCN11AQ9UI33 1791 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 TRBV23OR9-2A0A075B6M9 112 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 TMEM191CA6NGB0 347 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 CNOT3O75175 753 aaKnown RBP10.87□□□□□ -0.67
HIF3A-205ENST00000377670 CNPP09543 421 aaKnown RBP10.87□□□□□ -0.67
HIF3A-205ENST00000377670 CDK16Q00536 496 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 NDUFA9Q16795 377 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 SLC9A9Q8IVB4 645 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 UBE2E3Q969T4 207 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 PRKD2Q9BZL6 878 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 SNX6Q9UNH7 406 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 A0A0B4J269 797 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 KLRG2A4D1S0 409 aaPredicted RBP10.87□□□□□ -0.67
HIF3A-205ENST00000377670 FAM25AB3EWG3 89 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 FAM25CB3EWG5 89 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 FAM25GB3EWG6 89 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 M0R2N6 131 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 BAIAP3O94812 1187 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 OR4Q2P0C623 313 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 IDSP22304 550 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 FGFR3P22607 806 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 NTSP30990 170 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 CDH17Q12864 832 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 ZNF618Q5T7W0 954 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 CYP2R1Q6VVX0 501 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 YTHDF3Q7Z739 585 aaKnown RBP10.87□□□□□ -0.67
HIF3A-205ENST00000377670 PIGZQ86VD9 579 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 RAD21L1Q9H4I0 556 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 XPNPEP1Q9NQW7 623 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 OR12D3Q9UGF7 316 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 ERI2A8K979 691 aaKnown RBP10.87□□□□□ -0.67
HIF3A-205ENST00000377670 KATNA1O75449 491 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 MASP1P48740 699 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 COPZ1P61923 177 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 EML3Q32P44 896 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 PHF19Q5T6S3 580 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 N4BP2L1Q5TBK1 243 aaPredicted RBP10.87□□□□□ -0.67
HIF3A-205ENST00000377670 ATG16L2Q8NAA4 619 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 JOSD2Q8TAC2 188 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 LRRC15Q8TF66 581 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 ALG3Q92685 438 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 TBL1YQ9BQ87 522 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 HDHD2Q9H0R4 259 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 MYO9BQ13459 2157 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 PLIN4Q96Q06 1357 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 UBDO15205 165 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 INPPL1O15357 1258 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 SLC31A1O15431 190 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 RPL17P18621 184 aaKnown RBP10.86□□□□□ -0.67
HIF3A-205ENST00000377670 CDH3P22223 829 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 CORO1AP31146 461 aaKnown RBP10.86□□□□□ -0.67
HIF3A-205ENST00000377670 MAT2AP31153 395 aaKnown RBP10.86□□□□□ -0.67
HIF3A-205ENST00000377670 CHN2P52757 468 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.86□□□□□ -0.67
HIF3A-205ENST00000377670 VAC14Q08AM6 782 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 TAF13Q15543 124 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 DHFR2Q86XF0 187 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 HID1Q8IV36 788 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 CROCCP3Q8IVE0 287 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.86□□□□□ -0.67
HIF3A-205ENST00000377670 KRT84Q9NSB2 600 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 PCDHB3Q9Y5E6 796 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 KDM3BQ7LBC6 1761 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 PIPSLA2A3N6 862 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 IFNA14P01570 189 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 C4BPBP20851 252 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 HOXC12P31275 282 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 INAQ16352 499 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 AMZ1Q400G9 498 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 TAS2R13Q9NYV9 303 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 NFKBIL1Q9UBC1 381 aaPredicted RBP10.86□□□□□ -0.67
HIF3A-205ENST00000377670 SUCOQ9UBS9 1254 aaKnown RBP10.86□□□□□ -0.67
HIF3A-205ENST00000377670 RAD54BQ9Y620 910 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 TMEM265A0A087WTH1 108 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 NEMP2A6NFY4 417 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 UMPSP11172 480 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 CNTFP26441 200 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 CCT8P50990 548 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 HSPA14Q0VDF9 509 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 ILF2Q12905 390 aaKnown RBP10.86□□□□□ -0.67
HIF3A-205ENST00000377670 NRF1Q16656 503 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 DGUOKQ16854 277 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 PRSS55Q6UWB4 352 aaPredicted RBP10.86□□□□□ -0.67
HIF3A-205ENST00000377670 ZNF784Q8NCA9 323 aaPredicted RBP10.86□□□□□ -0.67
HIF3A-205ENST00000377670 MFSD14AQ96MC6 490 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 NAT9Q9BTE0 207 aa10.86□□□□□ -0.67
HIF3A-205ENST00000377670 SAR1AQ9NR31 198 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms