RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 MTF2Q9Y483 593 aaPredicted RBP16.61■□□□□ 0.25
TRIM39-201ENST00000376656 FADS3Q9Y5Q0 445 aa16.61■□□□□ 0.25
TRIM39-201ENST00000376656 A8MT66 165 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 EI24O14681 340 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 ACOX3O15254 700 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 SLC1A2P43004 574 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 LAMC2Q13753 1193 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 PSMD5Q16401 504 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 MOGQ16653 247 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 ZC3H7AQ8IWR0 971 aaKnown RBP16.6■□□□□ 0.25
TRIM39-201ENST00000376656 SLC15A4Q8N697 577 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 USP33Q8TEY7 942 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 SEPT8Q92599 483 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 ACDQ96AP0 544 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 ZUFSPQ96AP4 578 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 PHF21BQ96EK2 531 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 FAR2Q96K12 515 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 HSFY1Q96LI6 401 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 SPON1Q9HCB6 807 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 IGSF5Q9NSI5 407 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 TRNAU1APQ9NX07 287 aaKnown RBP16.6■□□□□ 0.25
TRIM39-201ENST00000376656 MAP10Q9P2G4 905 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 SLC2A6Q9UGQ3 507 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 C9JVG2 144 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 AURKAO14965 403 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 TSPAN1O60635 241 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 FASP25445 335 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 DNAJB1P25685 340 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 ARNTP27540 789 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 TPI1P60174 286 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 UGP2Q16851 508 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 ABRAXAS1Q6UWZ7 409 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 BNIPLQ7Z465 357 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 SPATA22Q8NHS9 363 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 CHPT1Q8WUD6 406 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 NT5C3BQ969T7 300 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 ABHD8Q96I13 439 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 C9orf16Q9BUW7 83 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 TRIM8Q9BZR9 551 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 SNX10Q9Y5X0 201 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 TRIM64BA6NI03 449 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 SOBPA7XYQ1 873 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 ALDOCP09972 364 aaKnown RBP16.6■□□□□ 0.25
TRIM39-201ENST00000376656 TTKP33981 857 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 POLR2IP36954 125 aaKnown RBP16.6■□□□□ 0.25
TRIM39-201ENST00000376656 CCT8P50990 548 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 GNA12Q03113 381 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 CAPRIN1Q14444 709 aaKnown RBP16.6■□□□□ 0.25
TRIM39-201ENST00000376656 DCAF15Q66K64 600 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 PKN3Q6P5Z2 889 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 RPL10LQ96L21 214 aaKnown RBP16.6■□□□□ 0.25
TRIM39-201ENST00000376656 ADAMTS10Q9H324 1103 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 SMARCAD1Q9H4L7 1026 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 ZNF112Q9UJU3 913 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 GJD2Q9UKL4 321 aa16.6■□□□□ 0.25
TRIM39-201ENST00000376656 NR5A2O00482 541 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 UBFD1O14562 309 aaKnown RBP16.59■□□□□ 0.25
TRIM39-201ENST00000376656 CLASP2O75122 1294 aaKnown RBP16.59■□□□□ 0.25
TRIM39-201ENST00000376656 ALDH2P05091 517 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 INSRRP14616 1297 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 MATN1P21941 496 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 IL10P22301 178 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 ADRA1BP35368 520 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 NFATC3Q12968 1075 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 INPP5AQ14642 412 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 NR1D2Q14995 579 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 TECRLQ5HYJ1 363 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 NAPEPLDQ6IQ20 393 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 PDZD4Q76G19 769 aaPredicted RBP16.59■□□□□ 0.25
TRIM39-201ENST00000376656 FAM35AQ86V20 835 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 ZNF354CQ86Y25 554 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 AFAP1L2Q8N4X5 818 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 C3orf30Q96M34 536 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 MAF1Q9H063 256 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 TRHDEQ9UKU6 1024 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 TCAF1Q9Y4C2 921 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 AQP12BA6NM10 295 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 SOCS7O14512 581 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 PGK2P07205 417 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 GNL1P36915 607 aaPredicted RBP16.59■□□□□ 0.25
TRIM39-201ENST00000376656 ARCN1P48444 511 aaKnown RBP16.59■□□□□ 0.25
TRIM39-201ENST00000376656 PLCL1Q15111 1095 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 KYAT1Q16773 422 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 RBM20Q5T481 1227 aaKnown RBP16.59■□□□□ 0.25
TRIM39-201ENST00000376656 BTBD8Q5XKL5 378 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 FAM117BQ6P1L5 589 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 LARP4Q71RC2 724 aaKnown RBP eCLIP16.59■□□□□ 0.25
TRIM39-201ENST00000376656 SPRED1Q7Z699 444 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 CNTN4Q8IWV2 1026 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 AQP12AQ8IXF9 295 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 ADGRG5Q8IZF4 528 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 WNT8BQ93098 351 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 HDAC10Q969S8 669 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 CENPNQ96H22 339 aaPredicted RBP16.59■□□□□ 0.25
TRIM39-201ENST00000376656 TEKT5Q96M29 485 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 EML4Q9HC35 981 aaKnown RBP16.59■□□□□ 0.25
TRIM39-201ENST00000376656 MRGBPQ9NV56 204 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 SNTG2Q9NY99 539 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 TRAF6Q9Y4K3 522 aa16.59■□□□□ 0.25
TRIM39-201ENST00000376656 BRWD3Q6RI45 1802 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms