RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 ALG11Q2TAA5 492 aa23.4■■□□□ 1.34
C9orf47-202ENST00000375850 PCDH19Q8TAB3 1148 aa23.4■■□□□ 1.34
C9orf47-202ENST00000375850 PCMTD1Q96MG8 357 aaPredicted RBP23.4■■□□□ 1.34
C9orf47-202ENST00000375850 APOOQ9BUR5 198 aa23.4■■□□□ 1.34
C9orf47-202ENST00000375850 KLC2Q9H0B6 622 aa23.4■■□□□ 1.34
C9orf47-202ENST00000375850 PCDH12Q9NPG4 1184 aa23.4■■□□□ 1.34
C9orf47-202ENST00000375850 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.4■■□□□ 1.34
C9orf47-202ENST00000375850 GULP1Q9UBP9 304 aa23.4■■□□□ 1.34
C9orf47-202ENST00000375850 PCDHGA7Q9Y5G6 932 aa23.4■■□□□ 1.34
C9orf47-202ENST00000375850 TCRBV5S1A1TA0A578 114 aa23.39■■□□□ 1.33
C9orf47-202ENST00000375850 PLD2O14939 933 aa23.39■■□□□ 1.33
C9orf47-202ENST00000375850 PDX1P52945 283 aa23.39■■□□□ 1.33
C9orf47-202ENST00000375850 TPI1P60174 286 aa23.39■■□□□ 1.33
C9orf47-202ENST00000375850 SRP54P61011 504 aaKnown RBP23.39■■□□□ 1.33
C9orf47-202ENST00000375850 DCUN1D2Q6PH85 259 aa23.39■■□□□ 1.33
C9orf47-202ENST00000375850 ENPP7Q6UWV6 458 aa23.39■■□□□ 1.33
C9orf47-202ENST00000375850 TTC9Q92623 222 aa23.39■■□□□ 1.33
C9orf47-202ENST00000375850 WDR92Q96MX6 357 aa23.39■■□□□ 1.33
C9orf47-202ENST00000375850 TMEM74Q96NL1 305 aa23.39■■□□□ 1.33
C9orf47-202ENST00000375850 MCEEQ96PE7 176 aa23.39■■□□□ 1.33
C9orf47-202ENST00000375850 GFM1Q96RP9 751 aaKnown RBP23.39■■□□□ 1.33
C9orf47-202ENST00000375850 SYNDIG1Q9H7V2 258 aa23.39■■□□□ 1.33
C9orf47-202ENST00000375850 PDFQ9HBH1 243 aa23.39■■□□□ 1.33
C9orf47-202ENST00000375850 SEPT11Q9NVA2 429 aaKnown RBP23.39■■□□□ 1.33
C9orf47-202ENST00000375850 KLQ9UEF7 1012 aa23.39■■□□□ 1.33
C9orf47-202ENST00000375850 GPR34Q9UPC5 381 aa23.39■■□□□ 1.33
C9orf47-202ENST00000375850 ATP8A1Q9Y2Q0 1164 aa23.39■■□□□ 1.33
C9orf47-202ENST00000375850 DGKBQ9Y6T7 804 aa23.39■■□□□ 1.33
C9orf47-202ENST00000375850 ARHGAP42A6NI28 874 aa23.38■■□□□ 1.33
C9orf47-202ENST00000375850 INSIG1O15503 277 aa23.38■■□□□ 1.33
C9orf47-202ENST00000375850 PRAMEF11O60813 436 aa23.38■■□□□ 1.33
C9orf47-202ENST00000375850 PIGNO95427 931 aa23.38■■□□□ 1.33
C9orf47-202ENST00000375850 TNFP01375 233 aa23.38■■□□□ 1.33
C9orf47-202ENST00000375850 ITIH2P19823 946 aa23.38■■□□□ 1.33
C9orf47-202ENST00000375850 KELP23276 732 aa23.38■■□□□ 1.33
C9orf47-202ENST00000375850 SERPINA4P29622 427 aa23.38■■□□□ 1.33
C9orf47-202ENST00000375850 MMP12P39900 470 aa23.38■■□□□ 1.33
C9orf47-202ENST00000375850 INPP5AQ14642 412 aa23.38■■□□□ 1.33
C9orf47-202ENST00000375850 FOXR1Q6PIV2 292 aa23.38■■□□□ 1.33
C9orf47-202ENST00000375850 CCDC81Q6ZN84 652 aa23.38■■□□□ 1.33
C9orf47-202ENST00000375850 KYQ8NBH2 561 aa23.38■■□□□ 1.33
C9orf47-202ENST00000375850 TSACCQ96A04 125 aaPredicted RBP23.38■■□□□ 1.33
C9orf47-202ENST00000375850 EXOC2Q96KP1 924 aa23.38■■□□□ 1.33
C9orf47-202ENST00000375850 RBM15Q96T37 977 aaKnown RBP eCLIP23.38■■□□□ 1.33
C9orf47-202ENST00000375850 AGPAT1Q99943 283 aa23.38■■□□□ 1.33
C9orf47-202ENST00000375850 LRRC19Q9H756 370 aa23.38■■□□□ 1.33
C9orf47-202ENST00000375850 ATP13A3Q9H7F0 1226 aa23.38■■□□□ 1.33
C9orf47-202ENST00000375850 ACSL6Q9UKU0 697 aa23.38■■□□□ 1.33
C9orf47-202ENST00000375850 MGAQ8IWI9 3026 aa23.37■■□□□ 1.33
C9orf47-202ENST00000375850 LGALS16A8MUM7 142 aa23.37■■□□□ 1.33
C9orf47-202ENST00000375850 D6RAR5 112 aa23.37■■□□□ 1.33
C9orf47-202ENST00000375850 J3QKU1 62 aa23.37■■□□□ 1.33
C9orf47-202ENST00000375850 CCKBRP32239 447 aa23.37■■□□□ 1.33
C9orf47-202ENST00000375850 LIG3P49916 1009 aa23.37■■□□□ 1.33
C9orf47-202ENST00000375850 COPB1P53618 953 aaKnown RBP23.37■■□□□ 1.33
C9orf47-202ENST00000375850 POLR2LP62875 67 aaKnown RBP23.37■■□□□ 1.33
C9orf47-202ENST00000375850 PPP1R15BQ5SWA1 713 aa23.37■■□□□ 1.33
C9orf47-202ENST00000375850 FBXO39Q8N4B4 442 aa23.37■■□□□ 1.33
C9orf47-202ENST00000375850 CCDC74AQ96AQ1 378 aa23.37■■□□□ 1.33
C9orf47-202ENST00000375850 TMEM159Q96B96 161 aa23.37■■□□□ 1.33
C9orf47-202ENST00000375850 COQ6Q9Y2Z9 468 aa23.37■■□□□ 1.33
C9orf47-202ENST00000375850 COL27A1Q8IZC6 1860 aaPredicted RBP23.36■■□□□ 1.33
C9orf47-202ENST00000375850 CACNB4O00305 520 aaPredicted RBP23.36■■□□□ 1.33
C9orf47-202ENST00000375850 HOXC4P09017 264 aaPredicted RBP23.36■■□□□ 1.33
C9orf47-202ENST00000375850 PNLIPP16233 465 aa23.36■■□□□ 1.33
C9orf47-202ENST00000375850 ZNF135P52742 658 aaPredicted RBP23.36■■□□□ 1.33
C9orf47-202ENST00000375850 INHBCP55103 352 aa23.36■■□□□ 1.33
C9orf47-202ENST00000375850 KIAA1024LP59773 190 aa23.36■■□□□ 1.33
C9orf47-202ENST00000375850 RPL7AP62424 266 aaKnown RBP23.36■■□□□ 1.33
C9orf47-202ENST00000375850 CLN3Q13286 438 aa23.36■■□□□ 1.33
C9orf47-202ENST00000375850 RFTN1Q14699 578 aaPredicted RBP23.36■■□□□ 1.33
C9orf47-202ENST00000375850 RAB11FIP2Q7L804 512 aa23.36■■□□□ 1.33
C9orf47-202ENST00000375850 ERGIC2Q96RQ1 377 aa23.36■■□□□ 1.33
C9orf47-202ENST00000375850 CCNL2Q96S94 520 aaPredicted RBP23.36■■□□□ 1.33
C9orf47-202ENST00000375850 FANCLQ9NW38 375 aa23.36■■□□□ 1.33
C9orf47-202ENST00000375850 SIRPGQ9P1W8 387 aa23.36■■□□□ 1.33
C9orf47-202ENST00000375850 LIMA1Q9UHB6 759 aaKnown RBP23.36■■□□□ 1.33
C9orf47-202ENST00000375850 ATXN7L1Q9ULK2 861 aaPredicted RBP23.36■■□□□ 1.33
C9orf47-202ENST00000375850 ZNF462Q96JM2 2506 aa23.35■■□□□ 1.33
C9orf47-202ENST00000375850 TNFRSF10CO14798 259 aa23.35■■□□□ 1.33
C9orf47-202ENST00000375850 CELA2BP08218 269 aaPredicted RBP23.35■■□□□ 1.33
C9orf47-202ENST00000375850 FERP16591 822 aa23.35■■□□□ 1.33
C9orf47-202ENST00000375850 NSUN2Q08J23 767 aaKnown RBP eCLIP23.35■■□□□ 1.33
C9orf47-202ENST00000375850 ACAD10Q6JQN1 1059 aa23.35■■□□□ 1.33
C9orf47-202ENST00000375850 XKR5Q6UX68 686 aa23.35■■□□□ 1.33
C9orf47-202ENST00000375850 RD3Q7Z3Z2 195 aa23.35■■□□□ 1.33
C9orf47-202ENST00000375850 SRLQ86TD4 932 aa23.35■■□□□ 1.33
C9orf47-202ENST00000375850 MCOLN2Q8IZK6 566 aa23.35■■□□□ 1.33
C9orf47-202ENST00000375850 GPR156Q8NFN8 814 aa23.35■■□□□ 1.33
C9orf47-202ENST00000375850 MED8Q96G25 268 aa23.35■■□□□ 1.33
C9orf47-202ENST00000375850 LRRN3Q9H3W5 708 aa23.35■■□□□ 1.33
C9orf47-202ENST00000375850 EPB41L5Q9HCM4 733 aa23.35■■□□□ 1.33
C9orf47-202ENST00000375850 APPL1Q9UKG1 709 aa23.35■■□□□ 1.33
C9orf47-202ENST00000375850 OR1A2Q9Y585 309 aa23.35■■□□□ 1.33
C9orf47-202ENST00000375850 CFAP46Q8IYW2 2715 aa23.35■■□□□ 1.33
C9orf47-202ENST00000375850 LRRC10BA6NIK2 292 aa23.34■■□□□ 1.33
C9orf47-202ENST00000375850 PDE2AO00408 941 aaPredicted RBP23.34■■□□□ 1.33
C9orf47-202ENST00000375850 PALMO75781 387 aa23.34■■□□□ 1.33
C9orf47-202ENST00000375850 PCCBP05166 539 aa23.34■■□□□ 1.33
C9orf47-202ENST00000375850 RPLP0P05388 317 aaKnown RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms