RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 WTIPA6NIX2 430 aaPredicted RBP13.77□□□□□ -0.2
COL4A1-201ENST00000375820 ULK1O75385 1050 aa13.77□□□□□ -0.2
COL4A1-201ENST00000375820 UGT2B15P54855 530 aa13.77□□□□□ -0.2
COL4A1-201ENST00000375820 TGFB2P61812 414 aa13.77□□□□□ -0.2
COL4A1-201ENST00000375820 GCNT1Q02742 428 aa13.77□□□□□ -0.2
COL4A1-201ENST00000375820 STK40Q8N2I9 435 aa13.77□□□□□ -0.2
COL4A1-201ENST00000375820 APBB2Q92870 758 aa13.77□□□□□ -0.2
COL4A1-201ENST00000375820 PRRG4Q9BZD6 226 aa13.77□□□□□ -0.2
COL4A1-201ENST00000375820 PNPOQ9NVS9 261 aa13.77□□□□□ -0.2
COL4A1-201ENST00000375820 KCNK4Q9NYG8 393 aa13.77□□□□□ -0.2
COL4A1-201ENST00000375820 ASF1AQ9Y294 204 aa13.77□□□□□ -0.2
COL4A1-201ENST00000375820 SPHKAPQ2M3C7 1700 aa13.77□□□□□ -0.2
COL4A1-201ENST00000375820 B4GALT5O43286 388 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 ADCY6O43306 1168 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 AHCYL1O43865 530 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 PRKAA2P54646 552 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 MSLNQ13421 630 aaPredicted RBP13.77□□□□□ -0.21
COL4A1-201ENST00000375820 VGLL4Q14135 290 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 GRB14Q14449 540 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 CREG2Q8IUH2 290 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 KATNAL2Q8IYT4 538 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 ART5Q96L15 291 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 MRPL9Q9BYD2 267 aaKnown RBP13.77□□□□□ -0.21
COL4A1-201ENST00000375820 ABHD16BQ9H3Z7 469 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 ALKBH4Q9NXW9 302 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 GULP1Q9UBP9 304 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 CD84Q9UIB8 345 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 A0A075B6Q4 140 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 LIASO43766 372 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 UBA1P22314 1058 aaKnown RBP13.77□□□□□ -0.21
COL4A1-201ENST00000375820 MC4RP32245 332 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 CDK7P50613 346 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 PPP2R2BQ00005 443 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.77□□□□□ -0.21
COL4A1-201ENST00000375820 FNIP1Q8TF40 1166 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 C2orf49Q9BVC5 232 aaPredicted RBP13.77□□□□□ -0.21
COL4A1-201ENST00000375820 CDADC1Q9BWV3 514 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 ATP13A3Q9H7F0 1226 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 NKIRAS2Q9NYR9 191 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 MSI1O43347 362 aaKnown RBP13.77□□□□□ -0.21
COL4A1-201ENST00000375820 TFPIP10646 304 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 POU5F1Q01860 360 aaKnown RBP13.77□□□□□ -0.21
COL4A1-201ENST00000375820 B3GNT6Q6ZMB0 384 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 RBM44Q6ZP01 1051 aaKnown RBP13.77□□□□□ -0.21
COL4A1-201ENST00000375820 C12orf56Q8IXR9 622 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 OR52E6Q96RD3 313 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 ZYG11BQ9C0D3 744 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 SPAG4Q9NPE6 437 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 C2CD2Q9Y426 696 aa13.77□□□□□ -0.21
COL4A1-201ENST00000375820 RECQL5O94762 991 aaPredicted RBP13.76□□□□□ -0.21
COL4A1-201ENST00000375820 SLC25A14O95258 325 aaPredicted RBP13.76□□□□□ -0.21
COL4A1-201ENST00000375820 GSTT1P30711 240 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 CD52P31358 61 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 MPPE1Q53F39 396 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 ULK3Q6PHR2 472 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 AFTPHQ6ULP2 937 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 GPRIN3Q6ZVF9 776 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 ZNF410Q86VK4 478 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 FAR1Q8WVX9 515 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 AARSD1Q9BTE6 412 aaKnown RBP13.76□□□□□ -0.21
COL4A1-201ENST00000375820 FAIM2Q9BWQ8 316 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 RACGAP1Q9H0H5 632 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 PSME2Q9UL46 239 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 TNPO3Q9Y5L0 923 aaKnown RBP13.76□□□□□ -0.21
COL4A1-201ENST00000375820 BMP7P18075 431 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 ATP4AP20648 1035 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 PTDSS1P48651 473 aaKnown RBP13.76□□□□□ -0.21
COL4A1-201ENST00000375820 DLG2Q15700 870 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 CXorf57Q6NSI4 855 aaKnown RBP13.76□□□□□ -0.21
COL4A1-201ENST00000375820 PTCHD4Q6ZW05 846 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 CMC1Q7Z7K0 106 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 FAM129CQ86XR2 697 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 TEX47Q8TBZ9 253 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 STARD8Q92502 1023 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 QRFPRQ96P65 431 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 FCRL4Q96PJ5 515 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.76□□□□□ -0.21
COL4A1-201ENST00000375820 ASTN2O75129 1339 aaPredicted RBP13.76□□□□□ -0.21
COL4A1-201ENST00000375820 FRMPD4Q14CM0 1322 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 TCRBV5S4A2TA0A5A2 114 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 GLRA2P23416 452 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 CLK3P49761 638 aaKnown RBP13.76□□□□□ -0.21
COL4A1-201ENST00000375820 RAB10P61026 200 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 QPRTQ15274 297 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 PLPP4Q5VZY2 271 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 CES5AQ6NT32 575 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 MOB2Q70IA6 237 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 LNX1Q8TBB1 728 aaPredicted RBP13.76□□□□□ -0.21
COL4A1-201ENST00000375820 PIWIL2Q8TC59 973 aaKnown RBP13.76□□□□□ -0.21
COL4A1-201ENST00000375820 PIH1D2Q8WWB5 315 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 HDAC10Q969S8 669 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 PMEPA1Q969W9 287 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 BLOC1S4Q9NUP1 217 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 INTS7Q9NVH2 962 aaKnown RBP13.76□□□□□ -0.21
COL4A1-201ENST00000375820 UMODL1Q5DID0 1318 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 MYPNQ86TC9 1320 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 SIN3BO75182 1162 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 EIF4BP23588 611 aaKnown RBP13.76□□□□□ -0.21
COL4A1-201ENST00000375820 MYL9P24844 172 aa13.76□□□□□ -0.21
COL4A1-201ENST00000375820 TNK2Q07912 1038 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms